RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SYNRGQ9UMZ2 1314 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 MYO1FO00160 1098 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 RAD21O60216 631 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 USP4Q13107 963 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 WDR19Q8NEZ3 1342 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 RHOXF2BP0C7M4 288 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 CUL4BQ13620 913 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 PKN1Q16512 942 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 TXNRD3Q86VQ6 643 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 SLC44A5Q8NCS7 719 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 ERVV-1B6SEH8 477 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 AKR1B15C9JRZ8 316 aaPredicted RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 CAMTA2O94983 1202 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 MORC3Q14149 939 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 ALX1Q15699 326 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 CC2D1AQ6P1N0 951 aaPredicted RBP12.01□□□□□ -0.49
CDH1-214ENST00000621016 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 MRFAP1Q9Y605 127 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CDH1-214ENST00000621016 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
CDH1-214ENST00000621016 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
CDH1-214ENST00000621016 ALS2Q96Q42 1657 aa12□□□□□ -0.49
CDH1-214ENST00000621016 TRIM49BA6NDI0 452 aa12□□□□□ -0.49
CDH1-214ENST00000621016 MYBL2P10244 700 aa12□□□□□ -0.49
CDH1-214ENST00000621016 MECOMQ03112 1051 aa12□□□□□ -0.49
CDH1-214ENST00000621016 DPYDQ12882 1025 aa12□□□□□ -0.49
CDH1-214ENST00000621016 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
CDH1-214ENST00000621016 HEATR3Q7Z4Q2 680 aa12□□□□□ -0.49
CDH1-214ENST00000621016 ITFG2Q969R8 447 aa12□□□□□ -0.49
CDH1-214ENST00000621016 ZNF512BQ96KM6 892 aaPredicted RBP12□□□□□ -0.49
CDH1-214ENST00000621016 ODF2LQ9ULJ1 636 aa12□□□□□ -0.49
CDH1-214ENST00000621016 USP17L3A6NCW0 530 aa12□□□□□ -0.49
CDH1-214ENST00000621016 USP17L4A6NCW7 530 aa12□□□□□ -0.49
CDH1-214ENST00000621016 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
CDH1-214ENST00000621016 USP5P45974 858 aa12□□□□□ -0.49
CDH1-214ENST00000621016 CCT5P48643 541 aa12□□□□□ -0.49
CDH1-214ENST00000621016 RAD9BQ6WBX8 426 aa12□□□□□ -0.49
CDH1-214ENST00000621016 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
CDH1-214ENST00000621016 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
CDH1-214ENST00000621016 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
CDH1-214ENST00000621016 FAM84BQ96KN1 310 aaPredicted RBP12□□□□□ -0.49
CDH1-214ENST00000621016 SLF1Q9BQI6 1058 aa12□□□□□ -0.49
CDH1-214ENST00000621016 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
CDH1-214ENST00000621016 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
CDH1-214ENST00000621016 CAPN7Q9Y6W3 813 aa12□□□□□ -0.49
CDH1-214ENST00000621016 PLCD1P51178 756 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 FILIP1LQ4L180 1135 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 EFCAB13Q8IY85 973 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 ARL10Q8N8L6 244 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
CDH1-214ENST00000621016 L2HGDHQ9H9P8 463 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 A0A087WUV0 522 aaPredicted RBP11.99□□□□□ -0.49
CDH1-214ENST00000621016 EIF4E1BA6NMX2 242 aaKnown RBP11.99□□□□□ -0.49
CDH1-214ENST00000621016 CCP110O43303 1012 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 NTSR2O95665 410 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 PYGLP06737 847 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 CCDC175P0C221 793 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 CDC25CP30307 473 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 FXR1P51114 621 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH1-214ENST00000621016 TFAP4Q01664 338 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 E2F5Q15329 346 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
CDH1-214ENST00000621016 ENOX1Q8TC92 643 aaKnown RBP11.99□□□□□ -0.49
CDH1-214ENST00000621016 ZNF384Q8TF68 577 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 GDAP1L1Q96MZ0 367 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 SEC23AQ15436 765 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 TMEM139Q8IV31 216 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 GUCA1BQ9UMX6 200 aa11.99□□□□□ -0.49
CDH1-214ENST00000621016 RNF225M0QZC1 329 aaPredicted RBP11.98□□□□□ -0.49
CDH1-214ENST00000621016 ENC1O14682 589 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 TROAPQ12815 778 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
CDH1-214ENST00000621016 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 RNF26Q9BY78 433 aaPredicted RBP11.98□□□□□ -0.49
CDH1-214ENST00000621016 TRIM10Q9UDY6 481 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 SAMM50Q9Y512 469 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 COL18A1P39060 1754 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 BCL9O00512 1426 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 UBXN1Q04323 297 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 INF2Q27J81 1249 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
CDH1-214ENST00000621016 ETAA1Q9NY74 926 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 TNS2Q63HR2 1409 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 KIF5CO60282 957 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 STX10O60499 249 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 STAT6P42226 847 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms