RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	ADAMTS5	Q9UNA0	930 aa		10.48	□□□□□ -0.73
TARDBP-222	ENST00000620505	COL11A1	P12107	1806 aa	Predicted RBP	10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	MYH7	P12883	1935 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505		F5H6K3	240 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	RNF113A	O15541	343 aa	Known RBP	10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	GPAA1	O43292	621 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	NDUFB10	O96000	172 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	KLRC3	Q07444	240 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	SHH	Q15465	462 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	ZNF792	Q3KQV3	632 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	SBK1	Q52WX2	424 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	C9orf50	Q5SZB4	431 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	GPR153	Q6NV75	609 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	REPS2	Q8NFH8	660 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	SEC62	Q99442	399 aa	Known RBP	10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	SLF1	Q9BQI6	1058 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	TINF2	Q9BSI4	451 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	ZNF214	Q9UL59	606 aa	Predicted RBP	10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	ISY1	Q9ULR0	285 aa	Known RBP	10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	RIPK3	Q9Y572	518 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	PARP14	Q460N5	1801 aa		10.47	□□□□□ -0.73
TARDBP-222	ENST00000620505	SZT2	Q5T011	3432 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	TRIM43B	A6NCK2	446 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	SPDYE4	A6NLX3	237 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	RARB	P10826	455 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	TLE2	Q04725	743 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	SNRNP48	Q6IEG0	339 aa	Known RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	LRRC47	Q8N1G4	583 aa	Known RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	KIFC2	Q96AC6	838 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	DDX11	Q96FC9	970 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	GPATCH3	Q96I76	525 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	DCTPP1	Q9H773	170 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	RAVER2	Q9HCJ3	691 aa	Known RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	PDLIM7	Q9NR12	457 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	NYAP2	Q9P242	653 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	STXBP5L	Q9Y2K9	1186 aa		10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.46	□□□□□ -0.73
TARDBP-222	ENST00000620505	RANBP2	P49792	3224 aa	Known RBP	10.46	□□□□□ -0.74
TARDBP-222	ENST00000620505	PQBP1	O60828	265 aa	Known RBP	10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	ITGB8	P26012	769 aa		10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	IRX5	P78411	483 aa	Predicted RBP	10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	RNF180	Q86T96	592 aa		10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	GUCD1	Q96NT3	240 aa		10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	PHF24	Q9UPV7	400 aa		10.45	□□□□□ -0.74
TARDBP-222	ENST00000620505	LTBP2	Q14767	1821 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	ROBO3	Q96MS0	1386 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	IGKV6D-41	A0A0C4DH26	115 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	PATL2	C9JE40	543 aa	Known RBP	10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZBED4	O75132	1171 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	SNAI1	O95863	264 aa	Predicted RBP	10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	AKR1A1	P14550	325 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	COPB2	P35606	906 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	SNX17	Q15036	470 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	GIMAP6	Q6P9H5	292 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	IFNL3	Q8IZI9	196 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	PRPF38A	Q8NAV1	312 aa	Known RBP	10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	CEP95	Q96GE4	821 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	FSD1	Q9BTV5	496 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	TEX13B	Q9BXU2	312 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	HOMER2	Q9NSB8	354 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	CNPY2	Q9Y2B0	182 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	DIS3	Q9Y2L1	958 aa	Known RBP	10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	PCDHB15	Q9Y5E8	787 aa		10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.44	□□□□□ -0.74
TARDBP-222	ENST00000620505	GREB1L	Q9C091	1923 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	SYNRG	Q9UMZ2	1314 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505		A0A1W2PQ45	241 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505		A0A1W2PQY0	241 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	MYADML2	A6NDP7	307 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	ADAMTS4	O75173	837 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZFY	P08048	801 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	CLTB	P09497	229 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	TSPY3	P0CV98	308 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	TSPY8	P0CW00	308 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	GNAT2	P19087	354 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	EPHB4	P54760	987 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	SNAP25	P60880	206 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	TFAP4	Q01664	338 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	ZNF697	Q5TEC3	545 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	SLFN13	Q68D06	897 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	CCDC129	Q6ZRS4	1044 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	ANKRD35	Q8N283	1001 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	INCENP	Q9NQS7	918 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	MTMR4	Q9NYA4	1195 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	NRBP1	Q9UHY1	535 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	MTMR7	Q9Y216	660 aa		10.43	□□□□□ -0.74
TARDBP-222	ENST00000620505	PLXNA1	Q9UIW2	1896 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	TMEM232	C9JQI7	657 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	ADCY6	O43306	1168 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	TTLL1	O95922	423 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	RAG1	P15918	1043 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	ACLY	P53396	1101 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	CTDSPL2	Q05D32	466 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	PPARA	Q07869	468 aa		10.42	□□□□□ -0.74
TARDBP-222	ENST00000620505	IK	Q13123	557 aa	Predicted RBP	10.42	□□□□□ -0.74

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