RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 SEPT11Q9NVA2 429 aaKnown RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 TAB2Q9NYJ8 693 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 LRWD1Q9UFC0 647 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 CCDC66A2RUB6 948 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 ZNF658Q5TYW1 1059 aaPredicted RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 LZTFL1Q9NQ48 299 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 KCNJ18B7U540 433 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 KRT86O43790 486 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 TUBBP07437 444 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 KCNJ12Q14500 433 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 MAP9Q49MG5 647 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 RWDD2AQ9UIY3 292 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 FOXP2O15409 715 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 KRT9P35527 623 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CD209Q9NNX6 404 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 ARFGAP3Q9NP61 516 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 PDE6BP35913 854 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 TXKP42681 527 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CDK8P49336 464 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CCZ1BP86790 482 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CCZ1P86791 482 aaPredicted RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 TROAPQ12815 778 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 NFIXQ14938 502 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 ELF2Q15723 593 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 ZNF569Q5MCW4 686 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 SRBD1Q8N5C6 995 aaKnown RBP11.14□□□□□ -0.63
CDH23-213ENST00000619887 MAPK8IP1Q9UQF2 711 aa11.14□□□□□ -0.63
CDH23-213ENST00000619887 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
CDH23-213ENST00000619887 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 RUFY1Q96T51 708 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
CDH23-213ENST00000619887 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 SAMSN1Q9NSI8 373 aaKnown RBP11.13□□□□□ -0.63
CDH23-213ENST00000619887 TUBGCP6Q96RT7 1819 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 NMT2O60551 498 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
CDH23-213ENST00000619887 ORC2Q13416 577 aaPredicted RBP11.13□□□□□ -0.63
CDH23-213ENST00000619887 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 PANX2Q96RD6 677 aa11.13□□□□□ -0.63
CDH23-213ENST00000619887 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 CARD6Q9BX69 1037 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 COA1Q9GZY4 146 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 SPDYE3A6NKU9 549 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 AKR1B10O60218 316 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 EEF1GP26641 437 aaKnown RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 DNM2P50570 870 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 DHTKD1Q96HY7 919 aaPredicted RBP11.12□□□□□ -0.63
CDH23-213ENST00000619887 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 STK24Q9Y6E0 443 aa11.12□□□□□ -0.63
CDH23-213ENST00000619887 MATR3P43243 847 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH23-213ENST00000619887 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 TNIP1Q15025 636 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 ARMCX5Q6P1M9 558 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 CCDC42Q96M95 316 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 BIN2Q9UBW5 565 aaPredicted RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 FOXN1O15353 648 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 TNNT3P45378 269 aaPredicted RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 PPP4CP60510 307 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 OR8K1Q8NGG5 319 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms