RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 SCLT1Q96NL6 688 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 DUSP10Q9Y6W6 482 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CSF1RP07333 972 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MED15Q96RN5 788 aa15.37■□□□□ 0.05
CNTNAP3B-215ENST00000619138 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 RANBP6O60518 1105 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 RTN1Q16799 776 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 TXNRD1Q16881 649 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 SPATA1Q5VX52 437 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 TMTC1Q8IUR5 882 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KIRREL3Q8IZU9 778 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KAT2BQ92831 832 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 HPSEQ9Y251 543 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 LUC7L2Q9Y383 392 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 NTSR2O95665 410 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KRT31Q15323 416 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 SYMPKQ92797 1274 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ZNHIT6Q9NWK9 470 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 HPCAL4Q9UM19 191 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 HNRNPH1P31943 449 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MAATS1Q7Z4T9 603 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 PANX2Q96RD6 677 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CXorf56Q9H5V9 222 aa15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ESYT3A0FGR9 886 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 GLI3P10071 1580 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 SYF2O95926 243 aaKnown RBP15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 SLC5A1P13866 664 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MCM7P33993 719 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 E2F5Q15329 346 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CNBD1Q8NA66 436 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 APPBP2Q92624 585 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CD248Q9HCU0 757 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ABCF2Q9UG63 623 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CIAO1O76071 339 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 IRAK1P51617 712 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CTCFLQ8NI51 663 aaPredicted RBP15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ABHD10Q9NUJ1 306 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MAGEC2Q9UBF1 373 aaPredicted RBP15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 JAG2Q9Y219 1238 aa15.35■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CNTNAP4Q9C0A0 1308 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 USP8P40818 1118 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ODF2Q5BJF6 829 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MSANTD4Q8NCY6 345 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 PPANQ9NQ55 473 aaKnown RBP15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 PDE8BO95263 885 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 PHKA1P46020 1223 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CDR1P51861 262 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ARMT1Q9H993 441 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 BRMS1Q9HCU9 246 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 A0A1B0GTH6 734 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 NDUFA10O95299 355 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MORC3Q14149 939 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 NELFBQ8WX92 580 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 CTAGE1Q96RT6 745 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KCNJ18B7U540 433 aa15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 COPB1P53618 953 aaKnown RBP15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 USP14P54578 494 aa15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 KCNJ12Q14500 433 aa15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 COG1Q8WTW3 980 aa15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.05
CNTNAP3B-215ENST00000619138 ZNF18P17022 549 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 HLTFQ14527 1009 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 NFIXQ14938 502 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 WTAPQ15007 396 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 ANKIB1Q9P2G1 1089 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 ADD3Q9UEY8 706 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 RAB21Q9UL25 225 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 SLC4A4Q9Y6R1 1079 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 ATRNO75882 1429 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 HSF2BPO75031 334 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 TOB1P50616 345 aaPredicted RBP15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 CHRNDQ07001 517 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 IFT88Q13099 833 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 ZSWIM5Q9P217 1185 aa15.33■□□□□ 0.04
CNTNAP3B-215ENST00000619138 TTC26A0AVF1 554 aa15.32■□□□□ 0.04
CNTNAP3B-215ENST00000619138 BCAMP50895 628 aa15.32■□□□□ 0.04
CNTNAP3B-215ENST00000619138 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
CNTNAP3B-215ENST00000619138 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms