RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SHC4Q6S5L8 630 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 RPGRIP1Q96KN7 1286 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
CNOT3-210ENST00000618939 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 ASIC2Q16515 512 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-210ENST00000618939 LRRC47Q8N1G4 583 aaKnown RBP15.46■□□□□ 0.07
CNOT3-210ENST00000618939 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
CNOT3-210ENST00000618939 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 VEZTQ9HBM0 779 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 USP17L8P0C7I0 530 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 LEMD3Q9Y2U8 911 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 A0A0G2JLW4 131 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 USP27XA6NNY8 438 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 LAD1O00515 517 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 ZNF658Q5TYW1 1059 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-210ENST00000618939 TMTC3Q6ZXV5 915 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 USP37Q86T82 979 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 AFAP1L1Q8TED9 768 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 ATRIPQ8WXE1 791 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 SLC39A2Q9NP94 309 aa15.46■□□□□ 0.07
CNOT3-210ENST00000618939 SRGAP1Q7Z6B7 1085 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 OXER1Q8TDS5 423 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 TUBGCP2Q9BSJ2 902 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 CUEDC2Q9H467 287 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 MAGEF1Q9HAY2 307 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 DNM3Q9UQ16 869 aa15.46■□□□□ 0.06
CNOT3-210ENST00000618939 EEF1GP26641 437 aaKnown RBP15.45■□□□□ 0.06
CNOT3-210ENST00000618939 RCAN1P53805 252 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 BICD1Q96G01 975 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 USP40Q9NVE5 1235 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 EBAG9O00559 213 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 CSF1RP07333 972 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
CNOT3-210ENST00000618939 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-210ENST00000618939 KLHL30Q0D2K2 578 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 TCP10Q12799 353 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 PLS1Q14651 629 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 XDHP47989 1333 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 CPDO75976 1380 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 CHMP2AO43633 222 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 RNASE9P60153 205 aaKnown RBP15.45■□□□□ 0.06
CNOT3-210ENST00000618939 CLEC4GQ6UXB4 293 aa15.45■□□□□ 0.06
CNOT3-210ENST00000618939 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 OVOS2A0A0G2JMS6 1433 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 UTP14CQ5TAP6 766 aaKnown RBP15.44■□□□□ 0.06
CNOT3-210ENST00000618939 SFMBT2Q5VUG0 894 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 ENAHQ8N8S7 591 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-210ENST00000618939 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 NUCKS1Q9H1E3 243 aaKnown RBP15.44■□□□□ 0.06
CNOT3-210ENST00000618939 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 ANTXR2P58335 489 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 FBXO38Q6PIJ6 1188 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 RWDD2AQ9UIY3 292 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 RASAL2Q9UJF2 1139 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 ZEB2O60315 1214 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 DYNLL2Q96FJ2 89 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 CNOT6LQ96LI5 555 aaKnown RBP15.44■□□□□ 0.06
CNOT3-210ENST00000618939 AK8Q96MA6 479 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 FRMD4BQ9Y2L6 1034 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 B4DLN1 442 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 CALUO43852 315 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-210ENST00000618939 PANX2Q96RD6 677 aa15.44■□□□□ 0.06
CNOT3-210ENST00000618939 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 GBP2P32456 591 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-210ENST00000618939 ARFGAP2Q8N6H7 521 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 DHTKD1Q96HY7 919 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-210ENST00000618939 PSTPIP2Q9H939 334 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 DIXDC1Q155Q3 683 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 USH1GQ495M9 461 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 GDAP1L1Q96MZ0 367 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
CNOT3-210ENST00000618939 SND1Q7KZF4 910 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNOT3-210ENST00000618939 FMNL3Q8IVF7 1028 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 ACRBPQ8NEB7 543 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 USP21Q9UK80 565 aa15.43■□□□□ 0.06
CNOT3-210ENST00000618939 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 CASP1P29466 404 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 NAA30Q147X3 362 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-210ENST00000618939 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 MYO1AQ9UBC5 1043 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
CNOT3-210ENST00000618939 GPBP1Q86WP2 473 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 TEKT1Q969V4 418 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 RICTORQ6R327 1708 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 CLCN6P51797 869 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 CFAP221Q4G0U5 840 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 IFT20Q8IY31 132 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 P2RX5Q93086 422 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms