RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TEPSINQ96N21 525 aa19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 IGKV6D-41A0A0C4DH26 115 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 KLRF2D3W0D1 207 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 hCG_1984214I3L0E3 225 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 MMP1P03956 469 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 ZNF713Q8N859 430 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 RRP36Q96EU6 259 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 SPZ1Q9BXG8 430 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 FOXP1Q9H334 677 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 ARHGEF10LQ9HCE6 1279 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 GINM1Q9NU53 330 aa19.31■□□□□ 0.68
TRAPPC3-210ENST00000617904 TNRC18O15417 2968 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 SCG2P13521 617 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 GSE1Q14687 1217 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 GALNT17Q6IS24 598 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 CEP131Q9UPN4 1083 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 OTOFQ9HC10 1997 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 CNTNAP5Q8WYK1 1306 aa19.3■□□□□ 0.68
TRAPPC3-210ENST00000617904 TESPA1A2RU30 521 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 PALM3A6NDB9 673 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 DTNBO60941 627 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 PLEKHA8P1O95397 391 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 KRT2P35908 639 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 ICA1Q05084 483 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 PFKFB3Q16875 520 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 KCNG4Q8TDN1 519 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 PTPN18Q99952 460 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
TRAPPC3-210ENST00000617904 YEATS4O95619 227 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 U2AF2P26368 475 aaKnown RBP eCLIP19.28■□□□□ 0.686e-6■□□□□ 10.3
TRAPPC3-210ENST00000617904 NLRP5P59047 1200 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 TRAF1Q13077 416 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 STK38Q15208 465 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 SH3BP5LQ7L8J4 393 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 SRBD1Q8N5C6 995 aaKnown RBP19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 DCAF4Q8WV16 495 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 MKL1Q969V6 931 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 ELP3Q9H9T3 547 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 PDE4DIPQ5VU43 2346 aa19.28■□□□□ 0.68
TRAPPC3-210ENST00000617904 FUT2Q10981 343 aa19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 CCDC96Q2M329 555 aa19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 DIS3L2Q8IYB7 885 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 OPTNQ96CV9 577 aa19.27■□□□□ 0.68
TRAPPC3-210ENST00000617904 BMP15O95972 392 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 PDHBP11177 359 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 CRHR2Q13324 411 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 OTOP1Q7RTM1 612 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 NOSTRINQ8IVI9 506 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 MS4A4AQ96JQ5 239 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 POLR3EQ9NVU0 708 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 TRIM17Q9Y577 477 aa19.26■□□□□ 0.67
TRAPPC3-210ENST00000617904 ASNSP08243 561 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 BICD2Q8TD16 824 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.675e-6■■■■■ 29.2
TRAPPC3-210ENST00000617904 GDPD2Q9HCC8 539 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 GOPCQ9HD26 462 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 RAD21O60216 631 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 SNHG28P0DPA3 235 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 GNA11P29992 359 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 SLC1A4P43007 532 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 VGLL4Q14135 290 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 AIFM3Q96NN9 605 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 PHF20Q9BVI0 1012 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 DNAJC18Q9H819 358 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 C6orf50Q9HD87 102 aa19.25■□□□□ 0.67
TRAPPC3-210ENST00000617904 GH2P01242 217 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 GUCY1A2P33402 732 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 ME1P48163 572 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 CAP1Q01518 475 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 ZNF543Q08ER8 600 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 SEPT2Q15019 361 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 PKN1Q16512 942 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 SLFN13Q68D06 897 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 FAM173BQ6P4H8 233 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms