RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 SLC6A19Q695T7 634 aa6.29□□□□□ -1.4
MALAT1-210ENST00000617489 THEMISQ8N1K5 641 aaPredicted RBP6.29□□□□□ -1.4
MALAT1-210ENST00000617489 TMEM87BQ96K49 555 aa6.29□□□□□ -1.4
MALAT1-210ENST00000617489 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
MALAT1-210ENST00000617489 KCNH3Q9ULD8 1083 aa6.29□□□□□ -1.4
MALAT1-210ENST00000617489 ABCA6Q8N139 1617 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 PTPRMP28827 1452 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 ERBINQ96RT1 1412 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 FITM1A5D6W6 292 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 FOXD2O60548 495 aaPredicted RBP6.28□□□□□ -1.4
MALAT1-210ENST00000617489 SEMA7AO75326 666 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 PDE4BQ07343 736 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 SEPT6Q14141 434 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 TCERG1LQ5VWI1 586 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 SPPL2CQ8IUH8 684 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
MALAT1-210ENST00000617489 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 Q96M66 194 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
MALAT1-210ENST00000617489 GPR160Q9UJ42 338 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 NUP155O75694 1391 aa6.28□□□□□ -1.4
MALAT1-210ENST00000617489 INO80Q9ULG1 1556 aaPredicted RBP6.27□□□□□ -1.41
MALAT1-210ENST00000617489 ADAMTSL3P82987 1691 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 MYOCOSA0A1B0GUC4 107 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 RFXAPO00287 272 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 GFRA2O00451 464 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 PEX10O60683 326 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 CCDC85BQ15834 202 aaPredicted RBP6.27□□□□□ -1.41
MALAT1-210ENST00000617489 GAB4Q2WGN9 574 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 INTS4Q96HW7 963 aaKnown RBP6.27□□□□□ -1.41
MALAT1-210ENST00000617489 ARID3AQ99856 593 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 SGPP1Q9BX95 441 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 SLC52A1Q9NWF4 448 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 KCTD3Q9Y597 815 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 PCDHB5Q9Y5E4 795 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 TACC3Q9Y6A5 838 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 ADGRL2O95490 1459 aa6.27□□□□□ -1.41
MALAT1-210ENST00000617489 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
MALAT1-210ENST00000617489 TSPYL5Q86VY4 417 aaPredicted RBP6.26□□□□□ -1.41
MALAT1-210ENST00000617489 SP110Q9HB58 689 aa6.26□□□□□ -1.41
MALAT1-210ENST00000617489 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
MALAT1-210ENST00000617489 PCDHA11Q9Y5I1 949 aa6.26□□□□□ -1.41
MALAT1-210ENST00000617489 EID1Q9Y6B2 187 aa6.26□□□□□ -1.41
MALAT1-210ENST00000617489 RIMS1Q86UR5 1692 aaKnown RBP6.26□□□□□ -1.41
MALAT1-210ENST00000617489 FER1L4A9Z1Z3 1794 aa6.26□□□□□ -1.41
MALAT1-210ENST00000617489 PTPRKQ15262 1439 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 TEX51A0A1B0GUA7 166 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 SYN1P17600 705 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
MALAT1-210ENST00000617489 FMR1Q06787 632 aaKnown RBP eCLIP6.25□□□□□ -1.41
MALAT1-210ENST00000617489 NFIXQ14938 502 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
MALAT1-210ENST00000617489 TMEM151BQ8IW70 566 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 ZNF552Q9H707 407 aaPredicted RBP6.25□□□□□ -1.41
MALAT1-210ENST00000617489 PLXNC1O60486 1568 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 CFAP65Q6ZU64 1925 aaKnown RBP6.25□□□□□ -1.41
MALAT1-210ENST00000617489 MADDQ8WXG6 1647 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 UHRF1BP1Q6BDS2 1440 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 SETD5Q9C0A6 1442 aa6.25□□□□□ -1.41
MALAT1-210ENST00000617489 HSPA2P54652 639 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 CHRNEQ04844 493 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 SNX17Q15036 470 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 NR0B2Q15466 257 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 DIEXFQ68CQ4 756 aaKnown RBP6.24□□□□□ -1.41
MALAT1-210ENST00000617489 MARCH10Q8NA82 808 aaPredicted RBP6.24□□□□□ -1.41
MALAT1-210ENST00000617489 DTWD2Q8NBA8 298 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 JARID2Q92833 1246 aaPredicted RBP6.24□□□□□ -1.41
MALAT1-210ENST00000617489 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 MIR1-1HGQ9H1L0 117 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 JAG2Q9Y219 1238 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 EIF2AK4Q9P2K8 1649 aaKnown RBP6.24□□□□□ -1.41
MALAT1-210ENST00000617489 NPATQ14207 1427 aa6.24□□□□□ -1.41
MALAT1-210ENST00000617489 CROCC2H7BZ55 1655 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 TNRQ92752 1358 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 A0A0G2JLL6 359 aaPredicted RBP6.23□□□□□ -1.41
MALAT1-210ENST00000617489 SASH1O94885 1247 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 EIF4BP23588 611 aaKnown RBP6.23□□□□□ -1.41
MALAT1-210ENST00000617489 GALK1P51570 392 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 DUSP4Q13115 394 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 IDI1Q13907 227 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 ZNF326Q5BKZ1 582 aaKnown RBP6.23□□□□□ -1.41
MALAT1-210ENST00000617489 DBX2Q6ZNG2 339 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 SIRT2Q8IXJ6 389 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 KCNC2Q96PR1 638 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 FAM135AQ9P2D6 1515 aa6.23□□□□□ -1.41
MALAT1-210ENST00000617489 CLTCQ00610 1675 aaKnown RBP6.23□□□□□ -1.41
MALAT1-210ENST00000617489 KDM5DQ9BY66 1539 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 LRRN2O75325 713 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 TNNI2P48788 182 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 CLEC16AQ2KHT3 1053 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 TSNAXIP1Q2TAA8 658 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
MALAT1-210ENST00000617489 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms