RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 RAD21O60216 631 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 CLSTN1O94985 981 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 SLC25A27O95847 323 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 AKR1B1P15121 316 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 ATP5JP18859 108 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 ICA1Q05084 483 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 CCDC129Q6ZRS4 1044 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 TINF2Q9BSI4 451 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 VCPKMTQ9H867 229 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 STARD7Q9NQZ5 370 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 FBXO28Q9NVF7 368 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
GPC6-202ENST00000617456 GRXCR1A8MXD5 290 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 DCDC2CA8MYV0 355 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 ZNF865P0CJ78 1059 aaPredicted RBP10.24□□□□□ -0.77
GPC6-202ENST00000617456 AKR1A1P14550 325 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 PDE6AP16499 860 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 FAAP100Q0VG06 881 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 HSP90AA2PQ14568 343 aaPredicted RBP10.24□□□□□ -0.77
GPC6-202ENST00000617456 KCTD2Q14681 263 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 SLC9C2Q5TAH2 1124 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 SIAH1Q8IUQ4 282 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 LCORLQ8N3X6 602 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 SECISBP2LQ93073 1101 aaKnown RBP10.24□□□□□ -0.77
GPC6-202ENST00000617456 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 GAS2L1Q99501 681 aaPredicted RBP10.24□□□□□ -0.77
GPC6-202ENST00000617456 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.24□□□□□ -0.77
GPC6-202ENST00000617456 SH2D4AQ9H788 454 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 CNPY2Q9Y2B0 182 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 TMX2Q9Y320 296 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 ZNF532Q9HCE3 1301 aa10.24□□□□□ -0.77
GPC6-202ENST00000617456 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 ADAMTS4O75173 837 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 TIMP1P01033 207 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 PBX2P40425 430 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 STAT3P40763 770 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ACLYP53396 1101 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 CCDC85BQ15834 202 aaPredicted RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 KCNA10Q16322 511 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.23□□□□□ -0.77
GPC6-202ENST00000617456 PRDM12Q9H4Q4 367 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ARMT1Q9H993 441 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 IL1RAPL2Q9NP60 686 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 DCP1AQ9NPI6 582 aaPredicted RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 ATP8A2Q9NTI2 1148 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 SWAP70Q9UH65 585 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ZHX1Q9UKY1 873 aaPredicted RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 NAV1Q8NEY1 1877 aa10.23□□□□□ -0.77
GPC6-202ENST00000617456 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
GPC6-202ENST00000617456 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 SMIM22K7EJ46 135 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 APBB1O00213 710 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 GOLIM4O00461 696 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 PRKAB2O43741 272 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 ACRP10323 421 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 EEF2P13639 858 aaKnown RBP10.22□□□□□ -0.77
GPC6-202ENST00000617456 IGFBP4P22692 258 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
GPC6-202ENST00000617456 PPIGQ13427 754 aaKnown RBP eCLIP10.22□□□□□ -0.77
GPC6-202ENST00000617456 UBE3CQ15386 1083 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 SLFNL1Q499Z3 407 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 TMEM240Q5SV17 173 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 ANKRD33Q7Z3H0 272 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 RIOX2Q8IUF8 465 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 TOX2Q96NM4 488 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 HAUS7Q99871 368 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
GPC6-202ENST00000617456 PBX4Q9BYU1 374 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 DCTPP1Q9H773 170 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 FAM184BQ9ULE4 1060 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 SYNRGQ9UMZ2 1314 aa10.22□□□□□ -0.77
GPC6-202ENST00000617456 A0A0G2JMZ2 1700 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 VWA5AO00534 786 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 MBD4O95243 580 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 CSF2RAP15509 400 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 CDK8P49336 464 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 FAM83BQ5T0W9 1011 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 MFSD5Q6N075 450 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 CCDC174Q6PII3 467 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 C16orf59Q7L2K0 433 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 KLHDC9Q8NEP7 349 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 ADAMTS19Q8TE59 1207 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 DDX11Q96FC9 970 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 PAG1Q9NWQ8 432 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 THEGQ9P2T0 379 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 TBX21Q9UL17 535 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.77
GPC6-202ENST00000617456 DIS3Q9Y2L1 958 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms