RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 PTPRFP10586 1907 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 SPDYE16A6NNV3 312 aaPredicted RBP18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 CDC27P30260 824 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 HERVK_113P62684 666 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 ME3Q16798 604 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 SYDE2Q5VT97 1194 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 ATG4CQ96DT6 458 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 RBM28Q9NW13 759 aaKnown RBP18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
PCDHGC3-204ENST00000617222 CA12O43570 354 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 PFKFB2O60825 505 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 TRPA1O75762 1119 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 PLEKHA8P1O95397 391 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 LARGE1O95461 756 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 NBPF11Q86T75 865 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 SMCR8Q8TEV9 937 aaPredicted RBP18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 LZTS2Q9BRK4 669 aa18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
PCDHGC3-204ENST00000617222 CCDC196A0A1B0GTZ2 297 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 MCM2P49736 904 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 SNAP25P60880 206 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 CRHR2Q13324 411 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 SLC35G1Q2M3R5 365 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 TMTC3Q6ZXV5 915 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 SRBD1Q8N5C6 995 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 CTDP1Q9Y5B0 961 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 LOC285556D6RIA3 1793 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 MYPNQ86TC9 1320 aa18.16■□□□□ 0.5
PCDHGC3-204ENST00000617222 VWA5AO00534 786 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 ZBED4O75132 1171 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 SCRN1Q12765 414 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 R3HDMLQ9H3Y0 253 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 RIOX1Q9H6W3 641 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 JMJD4Q9H9V9 463 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 RBPJLQ9UBG7 517 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 CPA4Q9UI42 421 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
PCDHGC3-204ENST00000617222 CYTH3O43739 400 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 PEX10O60683 326 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 SMARCA1P28370 1054 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 GCLCP48506 637 aaPredicted RBP18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 LBX2Q6XYB7 198 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 GTF3C2Q8WUA4 911 aaPredicted RBP18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 BEGAINQ9BUH8 593 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 NID2Q14112 1375 aa18.14■□□□□ 0.49
PCDHGC3-204ENST00000617222 CPLX1O14810 134 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 TLR2O60603 784 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 CNMDO75829 334 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 FDX1P10109 184 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 FUT2Q10981 343 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 CCDC174Q6PII3 467 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 MB21D1Q8N884 522 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 GTF3C6Q969F1 213 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 PIGSQ96S52 555 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 SPZ1Q9BXG8 430 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 RANBP17Q9H2T7 1088 aaKnown RBP18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 TXNRD2Q9NNW7 524 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 WBP1LQ9NX94 342 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 BTBD7Q9P203 1132 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 RABGAP1Q9Y3P9 1069 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 ADGRA2Q96PE1 1338 aa18.13■□□□□ 0.49
PCDHGC3-204ENST00000617222 PPFIA3O75145 1194 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 TMEM132BQ14DG7 1078 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 NTRK3Q16288 839 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 CDC37Q16543 378 aaPredicted RBP18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 Q3C1V9 767 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 CPLX2Q6PUV4 134 aaKnown RBP18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 CPXCR1Q8N123 301 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 REPS2Q8NFH8 660 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 SNX21Q969T3 373 aa18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 RAVER2Q9HCJ3 691 aaKnown RBP18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
PCDHGC3-204ENST00000617222 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 BCRP11274 1271 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 SLC4A3P48751 1232 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms