RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TNRQ92752 1358 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 ADCY8P40145 1251 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 RBL2Q08999 1139 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 VSTM4Q8IW00 320 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 GSDMBQ8TAX9 411 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 RNF14Q9UBS8 474 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 THAP12O43422 761 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 TAF5LO75529 589 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 CCDC89Q8N998 374 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 EPB41L5Q9HCM4 733 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 PDE8AO60658 829 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 STK10O94804 968 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 PHBP35232 272 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 ALS2CLQ60I27 953 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 KLHL29Q96CT2 875 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 HAUS7Q99871 368 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 TUBGCP2Q9BSJ2 902 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 C19orf44Q9H6X5 657 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 IFNAR2P48551 515 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 COG7P83436 770 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 SPATA5Q8NB90 893 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 ABCB6Q9NP58 842 aa11.71□□□□□ -0.53
CLTCL1-209ENST00000617103 IL2RBP14784 551 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 GABPB2Q8TAK5 448 aaPredicted RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 ENOX1Q8TC92 643 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 B4DLN1 442 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 NNTQ13423 1086 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 HSP90AA5PQ58FG0 334 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 SARM1Q6SZW1 724 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 PALM2Q8IXS6 379 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 LINC00301Q8NCQ3 95 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 ABCC2Q92887 1545 aa11.71□□□□□ -0.54
CLTCL1-209ENST00000617103 CRCPO75575 148 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 IFNB1P01574 187 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 RASSF7Q02833 373 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 LRRC8CQ8TDW0 803 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 JAG2Q9Y219 1238 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 CTNND1O60716 968 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 IL9RQ01113 521 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 OGFOD1Q8N543 542 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 BBOF1Q8ND07 529 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 FGAP02671 866 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 HARSP12081 509 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 N4BP2L2Q92802 583 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 TRPM2O94759 1503 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 PPARAQ07869 468 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 HIBCHQ6NVY1 386 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 CNOT10Q9H9A5 744 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 PPP1R9AQ9ULJ8 1098 aa11.7□□□□□ -0.54
CLTCL1-209ENST00000617103 A0A087WWV3 80 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 TRIM37O94972 964 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 VPS41P49754 854 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PTGDRQ13258 359 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PTPROQ16827 1216 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PPP4R1Q8TF05 950 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PKD2L1Q9P0L9 805 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 BZW2Q9Y6E2 419 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 RNASELQ05823 741 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 ADAT2Q7Z6V5 191 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 FAF1Q9UNN5 650 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms