RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 SPA17Q15506 151 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 KCTD19Q17RG1 926 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 GOLGA6L1Q8N7Z2 621 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 PLCG2P16885 1265 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 DHX40Q8IX18 779 aaKnown RBP16.65■□□□□ 0.26
TNFRSF11A-206ENST00000617039 NFIAQ12857 509 aa16.64■□□□□ 0.26
TNFRSF11A-206ENST00000617039 SF3A3Q12874 501 aaKnown RBP eCLIP16.64■□□□□ 0.26
TNFRSF11A-206ENST00000617039 RAPGEF1Q13905 1077 aa16.64■□□□□ 0.26
TNFRSF11A-206ENST00000617039 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.26
TNFRSF11A-206ENST00000617039 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SSR1P43307 286 aaKnown RBP16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ADCY7P51828 1080 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ZMYND10O75800 440 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SEPT2Q15019 361 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 DNAJC21Q5F1R6 531 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TPH2Q8IWU9 490 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ACRBPQ8NEB7 543 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 HARSP12081 509 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 FGFR2P21802 821 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 CYP27A1Q02318 531 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 VGLL2Q8N8G2 317 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 USP17L10C9JJH3 530 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SLU7O95391 586 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ICA1Q05084 483 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
TNFRSF11A-206ENST00000617039 B4DLN1 442 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 WNT7AO00755 349 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PAGE5Q96GU1 130 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SPAG5Q96R06 1193 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TDP2O95551 362 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 IQCB1Q15051 598 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 HSP90B2PQ58FF3 399 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 MLKLQ8NB16 471 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 MYRIPQ8NFW9 859 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TACC3Q9Y6A5 838 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 CCDC175P0C221 793 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ZNF408Q9H9D4 720 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 FAM217BQ9NTX9 383 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PCDHB13Q9Y5F0 798 aa16.62■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TCRBV5S4A2TA0A5A2 114 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 GH2P01242 217 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 AMPD3Q01432 767 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 RBL2Q08999 1139 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 CCDC122Q5T0U0 273 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 BCL9O00512 1426 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PLCG1P19174 1290 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PTPREP23469 700 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 EVCP57679 992 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 ZNF397Q8NF99 534 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PCDHA12Q9UN75 941 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 RPN1P04843 607 aaKnown RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
TNFRSF11A-206ENST00000617039 STAT3P40763 770 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 MON2Q7Z3U7 1717 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 MORC3Q14149 939 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 TSG101Q99816 390 aa16.6■□□□□ 0.25
TNFRSF11A-206ENST00000617039 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms