RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 SH3D19Q5HYK7 790 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 CST9Q5W186 159 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 GBA2Q9HCG7 927 aaPredicted RBP17.55■□□□□ 0.4
CBWD1-225ENST00000616944 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
CBWD1-225ENST00000616944 TMEM232C9JQI7 657 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
CBWD1-225ENST00000616944 STAT2P52630 851 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 PIGSQ96S52 555 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 A0A0G2JMZ2 1700 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 FOSBP53539 338 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 HMGCS2P54868 508 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 KRT40Q6A162 431 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
CBWD1-225ENST00000616944 KCNH4Q9UQ05 1017 aa17.54■□□□□ 0.4
CBWD1-225ENST00000616944 H3BQV1 296 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 IRF6O14896 467 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 F13A1P00488 732 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 PPIL2Q13356 520 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
CBWD1-225ENST00000616944 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
CBWD1-225ENST00000616944 ZBTB5O15062 677 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 NPY5RQ15761 445 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 TYW1BQ6NUM6 668 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
CBWD1-225ENST00000616944 OTUD5Q96G74 571 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 PHF20Q9BVI0 1012 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 SH3GLB2Q9NR46 395 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 BARHL2Q9NY43 387 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 VPS54Q9P1Q0 977 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 FEM1BQ9UK73 627 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CBWD1-225ENST00000616944 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 PNMA6FA0A0J9YX94 578 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 MMP1P03956 469 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 GJA5P36382 358 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 C1QTNF8P60827 252 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 FSTL1Q12841 308 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 RESTQ13127 1097 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 FAM160B2Q86V87 743 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 C2orf69Q8N8R5 385 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 CHURC1Q8WUH1 139 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 FBXO28Q9NVF7 368 aa17.51■□□□□ 0.39
CBWD1-225ENST00000616944 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
CBWD1-225ENST00000616944 STXBP3O00186 592 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 CXCL11O14625 94 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 CLEC17AQ6ZS10 378 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 XBP1P17861 261 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 KIF23Q02241 960 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 TRIM29Q14134 588 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 RANBP17Q9H2T7 1088 aaKnown RBP17.5■□□□□ 0.39
CBWD1-225ENST00000616944 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
CBWD1-225ENST00000616944 KIF28PB7ZC32 967 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
CBWD1-225ENST00000616944 MOGSQ13724 837 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 HEATR3Q7Z4Q2 680 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 PROCA1Q8NCQ7 364 aaPredicted RBP17.49■□□□□ 0.39
CBWD1-225ENST00000616944 SLC10A4Q96EP9 437 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 TMOD4Q9NZQ9 345 aa17.49■□□□□ 0.39
CBWD1-225ENST00000616944 U2AF2P26368 475 aaKnown RBP eCLIP17.48■□□□□ 0.39
CBWD1-225ENST00000616944 PRPF38AQ8NAV1 312 aaKnown RBP17.48■□□□□ 0.39
CBWD1-225ENST00000616944 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
CBWD1-225ENST00000616944 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
CBWD1-225ENST00000616944 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
CBWD1-225ENST00000616944 ESYT2A0FGR8 921 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 CATSPERGQ6ZRH7 1159 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 KIFC2Q96AC6 838 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 WNK4Q96J92 1243 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.47■□□□□ 0.39
CBWD1-225ENST00000616944 CEP350Q5VT06 3117 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 M0R2N6 131 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 FLOT1O75955 427 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
CBWD1-225ENST00000616944 DIS3L2Q8IYB7 885 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms