RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CASP1P29466 404 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 CDK8P49336 464 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 ZRSR1Q15695 479 aaKnown RBP12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 TMEM47Q9BQJ4 181 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 DDX4Q9NQI0 724 aaKnown RBP12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 MAD2L2Q9UI95 211 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
PCDHGA9-202ENST00000616887 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 XBP1P17861 261 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 NCAPHQ15003 741 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA9-202ENST00000616887 LDHCP07864 332 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 ATP1A3P13637 1013 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 PDE6BP35913 854 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 NLRP12P59046 1061 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 NLRP5P59047 1200 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 TMED8Q6PL24 325 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 EYA3Q99504 573 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 GAKO14976 1311 aa12.96□□□□□ -0.34
PCDHGA9-202ENST00000616887 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 CAVIN2O95810 425 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 LMOD1P29536 600 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 HSD3B7Q9H2F3 369 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 TUBE1Q9UJT0 475 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 GPS2Q13227 327 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 TMCO3Q6UWJ1 677 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 MYCBPQ99417 103 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 TTF2Q9UNY4 1162 aaKnown RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
PCDHGA9-202ENST00000616887 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 CACNB3P54284 484 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 C16orf86Q6ZW13 317 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 GPATCH11Q8N954 259 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 DHX58Q96C10 678 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 CDK5RAP2Q96SN8 1893 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 LRRC37AA6NMS7 1700 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 VWA3AA6NCI4 1184 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 SEC31AO94979 1220 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 ZRANB2O95218 330 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 CHRNA5P30532 468 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 MCM7P33993 719 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 PTGDRQ13258 359 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 GRM4Q14833 912 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 TTC38Q5R3I4 469 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 SRLQ86TD4 932 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 STAMQ92783 540 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 NCAPGQ9BPX3 1015 aa12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 NAT10Q9H0A0 1025 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
PCDHGA9-202ENST00000616887 ACTN4O43707 911 aaKnown RBP12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 NPR1P16066 1061 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 CDC25AP30304 524 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 KIF5BP33176 963 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 HEATR3Q7Z4Q2 680 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 DRC1Q96MC2 740 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 SMC2O95347 1197 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 GUCY2CP25092 1073 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 OAS2P29728 719 aaKnown RBP12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 NFIAQ12857 509 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 POSTNQ15063 836 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 IL17AQ16552 155 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 SHROOM1Q2M3G4 852 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 TBC1D22AQ8WUA7 517 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 XPO4Q9C0E2 1151 aaKnown RBP12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 BRMS1Q9HCU9 246 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
PCDHGA9-202ENST00000616887 CLGNO14967 610 aa12.92□□□□□ -0.34
PCDHGA9-202ENST00000616887 AFMP43652 599 aa12.92□□□□□ -0.34
PCDHGA9-202ENST00000616887 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms