RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MAML3Q96JK9 1138 aa17.57■□□□□ 0.4
UBXN1-218ENST00000616865 GUCD1Q96NT3 240 aa17.57■□□□□ 0.4
UBXN1-218ENST00000616865 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
UBXN1-218ENST00000616865 FAM47AQ5JRC9 791 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 IFNL3Q8IZI9 196 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 IL25Q9H293 177 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 CTNNA3Q9UI47 895 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
UBXN1-218ENST00000616865 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
UBXN1-218ENST00000616865 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
UBXN1-218ENST00000616865 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
UBXN1-218ENST00000616865 PRAMEF19Q5SWL8 479 aa17.55■□□□□ 0.4
UBXN1-218ENST00000616865 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
UBXN1-218ENST00000616865 PRDM5Q9NQX1 630 aaPredicted RBP17.55■□□□□ 0.4
UBXN1-218ENST00000616865 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
UBXN1-218ENST00000616865 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 SLC25A27O95847 323 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-218ENST00000616865 FCER1AP12319 257 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 CDK8P49336 464 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 PTH1RQ03431 593 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 LRRC41Q15345 812 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 ALX1Q15699 326 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-218ENST00000616865 C16orf86Q6ZW13 317 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 PDLIM7Q9NR12 457 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-218ENST00000616865 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
UBXN1-218ENST00000616865 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 USP17L12C9JPN9 530 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 USP17L21D6R901 530 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
UBXN1-218ENST00000616865 ADCYAP1R1P41586 468 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 C1orf53Q5VUE5 145 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 MMP19Q99542 508 aa17.53■□□□□ 0.4
UBXN1-218ENST00000616865 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
UBXN1-218ENST00000616865 EPB41L4AQ9HCS5 686 aaPredicted RBP17.53■□□□□ 0.4
UBXN1-218ENST00000616865 FGAP02671 866 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.4
UBXN1-218ENST00000616865 MCCP23508 829 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 SHHQ15465 462 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
UBXN1-218ENST00000616865 C9orf50Q5SZB4 431 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 RIOX2Q8IUF8 465 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBXN1-218ENST00000616865 BADQ92934 168 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
UBXN1-218ENST00000616865 FBXO28Q9NVF7 368 aa17.52■□□□□ 0.4
UBXN1-218ENST00000616865 SMCHD1A6NHR9 2005 aa17.52■□□□□ 0.39
UBXN1-218ENST00000616865 ZNF213O14771 459 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 RARBP10826 455 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 SBK1Q52WX2 424 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 MAP4K1Q92918 833 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 GOPCQ9HD26 462 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 XPNPEP3Q9NQH7 507 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-218ENST00000616865 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
UBXN1-218ENST00000616865 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
UBXN1-218ENST00000616865 ZMYM6O95789 1325 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 TRIM43BA6NCK2 446 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 VWA5AO00534 786 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 PGK2P07205 417 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 KCTD2Q14681 263 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
UBXN1-218ENST00000616865 TRIM43Q96BQ3 446 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-218ENST00000616865 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-218ENST00000616865 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
UBXN1-218ENST00000616865 FOXP2O15409 715 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 COPB2P35606 906 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 STAT3P40763 770 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 HAND2P61296 217 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 TLE2Q04725 743 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 PPARAQ07869 468 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 RNF180Q86T96 592 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
UBXN1-218ENST00000616865 EPB41L2O43491 1005 aaKnown RBP17.48■□□□□ 0.39
UBXN1-218ENST00000616865 RAD21O60216 631 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 PGK1P00558 417 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 CLTBP09497 229 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 ZNF865P0CJ78 1059 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-218ENST00000616865 AKR1A1P14550 325 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 TAL1P17542 331 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms