RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MRPL41Q8IXM3 137 aaKnown RBP4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 ADGRG2Q8IZP9 1017 aa4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 NOC4LQ9BVI4 516 aaKnown RBP4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 BCL11AQ9H165 835 aa4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 PARP2Q9UGN5 583 aa4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 CEP131Q9UPN4 1083 aa4.56□□□□□ -1.68
HMGB1P24-202ENST00000615653 RBM47A0AV96 593 aaKnown RBP4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 GRK4P32298 578 aa4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 LIMS1P48059 325 aa4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 PTPN11Q06124 597 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 FNIP1Q8TF40 1166 aa4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 GAL3ST3Q96A11 431 aa4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 GZF1Q9H116 711 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 TACC3Q9Y6A5 838 aa4.55□□□□□ -1.68
HMGB1P24-202ENST00000615653 SH3D21A4FU49 640 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 LIG3P49916 1009 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 AGMOQ6ZNB7 445 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 CEP128Q6ZU80 1094 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 SAPCD2Q86UD0 394 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 MAP6Q96JE9 813 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 C11orf21Q9P2W6 132 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 SUSD2Q9UGT4 822 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 TNFRSF18Q9Y5U5 241 aa4.54□□□□□ -1.68
HMGB1P24-202ENST00000615653 SORBS3O60504 671 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 PLA2G1BP04054 148 aaKnown RBP4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 MSL3P1P0C860 447 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 KLF10Q13118 480 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 CBX2Q14781 532 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 CDSNQ15517 529 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 TAF1CQ15572 869 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 WIPI1Q5MNZ9 446 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 DPH2Q9BQC3 489 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 PLCD4Q9BRC7 762 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 VPS11Q9H270 941 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 MRS2Q9HD23 443 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 TJP2Q9UDY2 1190 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 TSC22D4Q9Y3Q8 395 aa4.53□□□□□ -1.68
HMGB1P24-202ENST00000615653 PLATP00750 562 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 PFKLP17858 780 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 PWP1Q13610 501 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 RAB3GAP1Q15042 981 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 MEI1Q5TIA1 1274 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 CHST13Q8NET6 341 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 HHIPL1Q96JK4 782 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 TMEM87BQ96K49 555 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 MIR1-1HGQ9H1L0 117 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 USP31Q70CQ4 1352 aa4.52□□□□□ -1.69
HMGB1P24-202ENST00000615653 ZBTB7CA1YPR0 619 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 CTSHP09668 335 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 RPL10P27635 214 aaKnown RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 CDK8P49336 464 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 GJA9P57773 515 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 HTRA3P83110 453 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 TBC1D10BQ4KMP7 808 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 ZNF326Q5BKZ1 582 aaKnown RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 CCDC84Q86UT8 332 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 SSBP3Q9BWW4 388 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 RNF19AQ9NV58 838 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 VTI1BQ9UEU0 232 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 ZMYM5Q9UJ78 669 aa4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 ING1Q9UK53 422 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P24-202ENST00000615653 SHISA3A0PJX4 238 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 LRRN2O75325 713 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 RANGAP1P46060 587 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 PURAQ00577 322 aaKnown RBP4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 DLX2Q07687 328 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 LAPTM5Q13571 262 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 SEPT6Q14141 434 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 TSNAXIP1Q2TAA8 658 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 RNF111Q6ZNA4 994 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 PHC3Q8NDX5 983 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 NAF1Q96HR8 494 aaKnown RBP4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 PRDM14Q9GZV8 571 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 PMF1-BGLAPU3KQ54 211 aa4.5□□□□□ -1.69
HMGB1P24-202ENST00000615653 AMHP03971 560 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 TFE3P19532 575 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 ARL4AP40617 200 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 RPL6Q02878 288 aaKnown RBP4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 LMNB2Q03252 620 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 PDE4BQ07343 736 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 MAP3K11Q16584 847 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 TMCO4Q5TGY1 634 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 WAPLQ7Z5K2 1190 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 CARFQ8N187 725 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 RNF141Q8WVD5 230 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 KISS1RQ969F8 398 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 RSRP1Q9BUV0 290 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 BCL2L13Q9BXK5 485 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 TNFRSF12AQ9NP84 129 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 HS3ST3A1Q9Y663 406 aa4.49□□□□□ -1.69
HMGB1P24-202ENST00000615653 LTBP3Q9NS15 1303 aa4.48□□□□□ -1.69
HMGB1P24-202ENST00000615653 GFRA2O00451 464 aa4.48□□□□□ -1.69
HMGB1P24-202ENST00000615653 BPNT1O95861 308 aa4.48□□□□□ -1.69
HMGB1P24-202ENST00000615653 INHBEP58166 350 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms