RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 GOLGA6L19H0YKK7 550 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 CALRP27797 417 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 OAS2P29728 719 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 TNNI2P48788 182 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 ERCC6LQ2NKX8 1250 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 MMS22LQ6ZRQ5 1243 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 C16orf86Q6ZW13 317 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 SH3BP5LQ7L8J4 393 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.031e-11■■■■■ 45.9
FOXN3-219ENST00000615335 ADARB2Q9NS39 739 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 RBM28Q9NW13 759 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 ORC4O43929 436 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 CPP00450 1065 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 CDK8P49336 464 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ANTXR2P58335 489 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ZNF444Q8N0Y2 327 aaPredicted RBP14.84□□□□□ -0.03
FOXN3-219ENST00000615335 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
FOXN3-219ENST00000615335 USP28Q96RU2 1077 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 TNFAIP1Q13829 316 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 STX1AQ16623 288 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ARHGAP29Q52LW3 1261 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ANGEL2Q5VTE6 544 aaKnown RBP14.84□□□□□ -0.03
FOXN3-219ENST00000615335 FAM83AQ86UY5 434 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 LRRC8AQ8IWT6 810 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ANKRD20A12PQ8NF67 263 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 ZKSCAN3Q9BRR0 538 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 GOLPH3LQ9H4A5 285 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 CNTNAP1P78357 1384 aa14.84□□□□□ -0.03
FOXN3-219ENST00000615335 TSPY2A6NKD2 308 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 MAP2K2P36507 400 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
FOXN3-219ENST00000615335 IQCB1Q15051 598 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 L3MBTL3Q96JM7 780 aaPredicted RBP14.83□□□□□ -0.04
FOXN3-219ENST00000615335 KINO60870 393 aaKnown RBP14.83□□□□□ -0.04
FOXN3-219ENST00000615335 GUCY1B3Q02153 619 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 RASA3Q14644 834 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
FOXN3-219ENST00000615335 C11orf57Q6ZUT1 292 aaPredicted RBP14.83□□□□□ -0.04
FOXN3-219ENST00000615335 UBAC1Q9BSL1 405 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 ATRNL1Q5VV63 1379 aa14.83□□□□□ -0.04
FOXN3-219ENST00000615335 WDR19Q8NEZ3 1342 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 ERICH2A1L162 156 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SLURP2P0DP57 97 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 GABPAQ06546 454 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SNW1Q13573 536 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 IQCA1Q86XH1 822 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 FOXP4Q8IVH2 680 aaPredicted RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 EHD4Q9H223 541 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 GGA3Q9NZ52 723 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SWAP70Q9UH65 585 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 FAM196BA6NMK8 535 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TSPY3P0CV98 308 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TSPY8P0CW00 308 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 ME1P48163 572 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TFAP4Q01664 338 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SMC1AQ14683 1233 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 ZRSR1Q15695 479 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 REXO1L1PQ8IX06 675 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 CCAR2Q8N163 923 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TMEM87BQ96K49 555 aa14.82□□□□□ -0.04
FOXN3-219ENST00000615335 TACO1Q9BSH4 297 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
FOXN3-219ENST00000615335 MYH8P13535 1937 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 COL2A1P02458 1487 aaPredicted RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 EIF3CLB5ME19 914 aaKnown RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 RASA1P20936 1047 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 EPHX2P34913 555 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 CORO7P57737 925 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 ENGASEQ8NFI3 743 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 UBXN4Q92575 508 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 EIF3CQ99613 913 aaKnown RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 DEFB129Q9H1M3 183 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 ANGEL1Q9UNK9 670 aaKnown RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 SKILP12757 684 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 APOBEC3FQ8IUX4 373 aaKnown RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 CDAN1Q8IWY9 1227 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 IGDCC4Q8TDY8 1250 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
FOXN3-219ENST00000615335 ANO10Q9NW15 660 aa14.81□□□□□ -0.04
FOXN3-219ENST00000615335 POLR2AP24928 1970 aaKnown RBP14.8□□□□□ -0.04
FOXN3-219ENST00000615335 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 BECN2A8MW95 431 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 LMAN1P49257 510 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms