RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 SLF1Q9BQI6 1058 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 PDHXO00330 501 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
MMP28-205ENST00000615317 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 SNAP25P60880 206 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 KIF23Q02241 960 aaPredicted RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 SREBF2Q12772 1141 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 NOGQ13253 232 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 NSUN7Q8NE18 718 aaKnown RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 ATG4CQ96DT6 458 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 PRR12Q9ULL5 1215 aa10.58□□□□□ -0.72
MMP28-205ENST00000615317 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
MMP28-205ENST00000615317 CCDC196A0A1B0GTZ2 297 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L15C9J2P7 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L13C9JLJ4 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L11C9JVI0 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L18D6R9N7 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L22D6RA61 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L17D6RBQ6 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L19D6RCP7 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L20D6RJB6 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CYTH3O43739 400 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CDKL5O76039 1030 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CTDNEP1O95476 244 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CYP2C8P10632 490 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 VEGFBP49765 207 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 FOSBP53539 338 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 USP17L24Q0WX57 530 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PABPC4Q13310 644 aaKnown RBP eCLIP10.57□□□□□ -0.72
MMP28-205ENST00000615317 BECN1Q14457 450 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 NTRK3Q16288 839 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CCDC174Q6PII3 467 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 CPLX2Q6PUV4 134 aaKnown RBP10.57□□□□□ -0.72
MMP28-205ENST00000615317 CATSPERGQ6ZRH7 1159 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 FAM160B2Q86V87 743 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
MMP28-205ENST00000615317 DDX11Q96FC9 970 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PIGSQ96S52 555 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
MMP28-205ENST00000615317 PTPN18Q99952 460 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
MMP28-205ENST00000615317 VAT1LQ9HCJ6 419 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 FEM1BQ9UK73 627 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 PLXNA1Q9UIW2 1896 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 STK36Q9NRP7 1315 aa10.57□□□□□ -0.72
MMP28-205ENST00000615317 ZNF236Q9UL36 1845 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
MMP28-205ENST00000615317 PEX10O60683 326 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 HSP90AA1P07900 732 aaKnown RBP10.56□□□□□ -0.72
MMP28-205ENST00000615317 OSBPP22059 807 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 GNAQP50148 359 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 HERVK_113P62684 666 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 FUT2Q10981 343 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 TAF1CQ15572 869 aaPredicted RBP10.56□□□□□ -0.72
MMP28-205ENST00000615317 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 ADGRF4Q8IZF3 695 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 GPKOWQ92917 476 aaPredicted RBP eCLIP10.56□□□□□ -0.72
MMP28-205ENST00000615317 LZTS2Q9BRK4 669 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 PAGR1Q9BTK6 254 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 RANBP17Q9H2T7 1088 aaKnown RBP10.56□□□□□ -0.72
MMP28-205ENST00000615317 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
MMP28-205ENST00000615317 MYPNQ86TC9 1320 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 ADGRA2Q96PE1 1338 aa10.56□□□□□ -0.72
MMP28-205ENST00000615317 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
MMP28-205ENST00000615317 IFNAR1P17181 557 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 HOXA7P31268 230 aaPredicted RBP10.55□□□□□ -0.72
MMP28-205ENST00000615317 DSG3P32926 999 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 CUL4AQ13619 759 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 PPP2R5BQ15173 497 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 USH1GQ495M9 461 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 BTNL9Q6UXG8 535 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 TRIM22Q8IYM9 498 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 CHURC1Q8WUH1 139 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
MMP28-205ENST00000615317 AIFM3Q96NN9 605 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 RNF26Q9BY78 433 aaPredicted RBP10.55□□□□□ -0.72
MMP28-205ENST00000615317 JMJD4Q9H9V9 463 aa10.55□□□□□ -0.72
MMP28-205ENST00000615317 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms