RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SLC39A2Q9NP94 309 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 TECP42680 631 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 RAD51AP2Q09MP3 1159 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 TTC19Q6DKK2 380 aaPredicted RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 MAPKAPK5Q8IW41 473 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 GSPT2Q8IYD1 628 aaKnown RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 TUBGCP2Q9BSJ2 902 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 TBC1D7Q9P0N9 293 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 A0A0U1RQJ8 604 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 F8W031 263 aaPredicted RBP14.02□□□□□ -0.16
MSH6-213ENST00000614496 ACTN2P35609 894 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 PRCPP42785 496 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 VSNL1P62760 191 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 ATRIPQ8WXE1 791 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 SETDB2Q96T68 719 aa14.02□□□□□ -0.16
MSH6-213ENST00000614496 FAM217BQ9NTX9 383 aaPredicted RBP14.02□□□□□ -0.16
MSH6-213ENST00000614496 GOLGA6CA6NDK9 693 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 GOLGA6BA6NDN3 693 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
MSH6-213ENST00000614496 GOLGA6DP0CG33 693 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 MAGEA1P43355 309 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 PICALMQ13492 652 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 RRAGAQ7L523 313 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 CEP89Q96ST8 783 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.17
MSH6-213ENST00000614496 NBPF3Q9H094 633 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 CPVLQ9H3G5 476 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 GOLGA6AQ9NYA3 693 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 CXCR5P32302 372 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 PTPROQ16827 1216 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 ZNF658Q5TYW1 1059 aaPredicted RBP14.02□□□□□ -0.17
MSH6-213ENST00000614496 INTS13Q9NVM9 706 aa14.02□□□□□ -0.17
MSH6-213ENST00000614496 ADD3Q9UEY8 706 aaKnown RBP14.02□□□□□ -0.17
MSH6-213ENST00000614496 JCADQ9P266 1359 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 RWDD2AQ9UIY3 292 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 TRAF5O00463 557 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 IL6STP40189 918 aaPredicted RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 CRKLP46109 303 aaKnown RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 DNM2P50570 870 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 CCDC93Q567U6 631 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 SV2BQ7L1I2 683 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 TGFBRAP1Q8WUH2 860 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 EXOC4Q96A65 974 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 EBAG9O00559 213 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 USP17L8P0C7I0 530 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 RRP36Q96EU6 259 aaKnown RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 BIN2Q9UBW5 565 aaPredicted RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 RRP15Q9Y3B9 282 aaKnown RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 ABCC12Q96J65 1359 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 BUB1O43683 1085 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 N4BP1O75113 896 aaKnown RBP14.01□□□□□ -0.17
MSH6-213ENST00000614496 RNF40O75150 1001 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 SASH3O75995 380 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 C2orf54Q08AI8 447 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
MSH6-213ENST00000614496 FOXP2O15409 715 aa14□□□□□ -0.17
MSH6-213ENST00000614496 GYPCP04921 128 aa14□□□□□ -0.17
MSH6-213ENST00000614496 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
MSH6-213ENST00000614496 PRPF4BQ13523 1007 aaKnown RBP14□□□□□ -0.17
MSH6-213ENST00000614496 TTC31Q49AM3 519 aaPredicted RBP14□□□□□ -0.17
MSH6-213ENST00000614496 TMTC3Q6ZXV5 915 aa14□□□□□ -0.17
MSH6-213ENST00000614496 ZSCAN29Q8IWY8 852 aaPredicted RBP14□□□□□ -0.17
MSH6-213ENST00000614496 CNOT6LQ96LI5 555 aaKnown RBP14□□□□□ -0.17
MSH6-213ENST00000614496 SPAG5Q96R06 1193 aa14□□□□□ -0.17
MSH6-213ENST00000614496 CDHR2Q9BYE9 1310 aa14□□□□□ -0.17
MSH6-213ENST00000614496 C6orf229H3BNL8 230 aa14□□□□□ -0.17
MSH6-213ENST00000614496 KRT79Q5XKE5 535 aa14□□□□□ -0.17
MSH6-213ENST00000614496 BRINP3Q76B58 766 aa14□□□□□ -0.17
MSH6-213ENST00000614496 DDAH1O94760 285 aa14□□□□□ -0.17
MSH6-213ENST00000614496 LDHCP07864 332 aa14□□□□□ -0.17
MSH6-213ENST00000614496 RAPGEF1Q13905 1077 aa14□□□□□ -0.17
MSH6-213ENST00000614496 C8orf74Q6P047 294 aa14□□□□□ -0.17
MSH6-213ENST00000614496 NOA1Q8NC60 698 aaKnown RBP14□□□□□ -0.17
MSH6-213ENST00000614496 FAM71BQ8TC56 605 aa14□□□□□ -0.17
MSH6-213ENST00000614496 GPCPD1Q9NPB8 672 aa14□□□□□ -0.17
MSH6-213ENST00000614496 ATP2C2O75185 946 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 GNA11P29992 359 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 LONP1P36776 959 aaKnown RBP13.99□□□□□ -0.17
MSH6-213ENST00000614496 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
MSH6-213ENST00000614496 EARS2Q5JPH6 523 aaKnown RBP13.99□□□□□ -0.17
MSH6-213ENST00000614496 NELFCDQ8IXH7 590 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 LRWD1Q9UFC0 647 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 SMCO2A6NFE2 343 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 PNKPQ96T60 521 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 OPA1O60313 960 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 VAV2P52735 878 aa13.99□□□□□ -0.17
MSH6-213ENST00000614496 MB21D1Q8N884 522 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms