RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 FAM89AQ96GI7 184 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 PLEKHG4BQ96PX9 1271 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 SLC4A9Q96Q91 983 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 SLX1AQ9BQ83 275 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 POLR3CQ9BUI4 534 aaPredicted RBP7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 STRN4Q9NRL3 753 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 DDX19AQ9NUU7 478 aaKnown RBP7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 LAMB4A4D0S4 1761 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 ARFGEF2Q9Y6D5 1785 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 PAPPAQ13219 1627 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 BCL9O00512 1426 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 TTC24A2A3L6 582 aaPredicted RBP7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 EXOC5O00471 708 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 RPS6KA5O75582 802 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 FGAP02671 866 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 IFT88Q13099 833 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 UBE3CQ15386 1083 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 HLFQ16534 295 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 DBN1Q16643 649 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 GIMAP6Q6P9H5 292 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 CYP4X1Q8N118 509 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 MIPOL1Q8TD10 442 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 CDCA7Q9BWT1 371 aaPredicted RBP7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 C1QTNF2Q9BXJ5 285 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 TLL2Q9Y6L7 1015 aa7.57□□□□□ -1.2
CDKAL1-204ENST00000613575 M0R2C6 588 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 GDF9O60383 454 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 PDE8AO60658 829 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 PDE8BO95263 885 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ADCY5O95622 1261 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ALDH1A1P00352 501 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 HCLS1P14317 486 aaPredicted RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 FGFR2P21802 821 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ADORA1P30542 326 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 SESN3P58005 492 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 RBM6P78332 1123 aaKnown RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TTF1Q15361 905 aaPredicted RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ALX1Q15699 326 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TTC39AQ5SRH9 613 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ACBD5Q5T8D3 534 aaPredicted RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 ZSCAN25Q6NSZ9 544 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 FAM173BQ6P4H8 233 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 LDHAL6AQ6ZMR3 332 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TADA2BQ86TJ2 420 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 FERMT3Q86UX7 667 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TRIM42Q8IWZ5 723 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 MICALL1Q8N3F8 863 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 MICAL1Q8TDZ2 1067 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TRIM7Q9C029 511 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 CLSTN2Q9H4D0 955 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 HOMER3Q9NSC5 361 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 BTG4Q9NY30 223 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 CLIP2Q9UDT6 1046 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 USP25Q9UHP3 1055 aa7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 XIRP1Q702N8 1843 aaKnown RBP7.56□□□□□ -1.2
CDKAL1-204ENST00000613575 SIAH2O43255 324 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 FDPSP14324 419 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 VCAM1P19320 739 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ITGA6P23229 1130 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ALDH1B1P30837 517 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ADD2P35612 726 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 SOX11P35716 441 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ZAP70P43403 619 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 CTSWP56202 376 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 MCCD1P59942 119 aaPredicted RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 FKBP4Q02790 459 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 STK3Q13188 491 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 SCARF1Q14162 830 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 IMMTQ16891 758 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 IQCF2Q8IXL9 164 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 MB21D2Q8IYB1 491 aaPredicted RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 KIAA1524Q8TCG1 905 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 BICD1Q96G01 975 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ERO1AQ96HE7 468 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 DACT1Q9NYF0 836 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 TMOD4Q9NZQ9 345 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 MCM8Q9UJA3 840 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 SPEF2Q9C093 1822 aa7.55□□□□□ -1.2
CDKAL1-204ENST00000613575 NUP188Q5SRE5 1749 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 A0A0G2JLW4 131 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 SHTN1A0MZ66 631 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 H3BQV1 296 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 DTNBO60941 627 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 UQCRFS1P1P0C7P4 283 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 VDRP11473 427 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 FLT3P36888 993 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 MRPL12P52815 198 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 APOBRQ0VD83 1088 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms