RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 IGF2BP3O00425 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATF3-210ENST00000613104 ST18O60284 1047 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
ATF3-210ENST00000613104 PDIA3P30101 505 aaKnown RBP10.85□□□□□ -0.67
ATF3-210ENST00000613104 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 GRM1Q13255 1194 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 GPATCH4Q5T3I0 446 aaKnown RBP10.85□□□□□ -0.67
ATF3-210ENST00000613104 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 FAM43AQ8N2R8 423 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 FANCBQ8NB91 859 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 NUP88Q99567 741 aaPredicted RBP10.85□□□□□ -0.67
ATF3-210ENST00000613104 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 FEM1BQ9UK73 627 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
ATF3-210ENST00000613104 FRMPD2Q68DX3 1309 aaPredicted RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 RAD21O60216 631 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 RXRAP19793 462 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 MCM2P49736 904 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 PABPC4Q13310 644 aaKnown RBP eCLIP10.84□□□□□ -0.67
ATF3-210ENST00000613104 PPP2R5BQ15173 497 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 ME3Q16798 604 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 RTN1Q16799 776 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 CCDC96Q2M329 555 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 KCTD1Q719H9 257 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 FAM160B2Q86V87 743 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 CTCFLQ8NI51 663 aaPredicted RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
ATF3-210ENST00000613104 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
ATF3-210ENST00000613104 GOLGA8AA7E2F4 631 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 TMEM232C9JQI7 657 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 KLRF2D3W0D1 207 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 PDHXO00330 501 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 PFKFB2O60825 505 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 LARGE1O95461 756 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 OSBPP22059 807 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 SMARCA1P28370 1054 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 CDC27P30260 824 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 KIF5BP33176 963 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 GNAQP50148 359 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 METAP2P50579 478 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATF3-210ENST00000613104 STAT2P52630 851 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 COG2Q14746 738 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 OTUD7BQ6GQQ9 843 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 LBX2Q6XYB7 198 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 CHURC1Q8WUH1 139 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 SNX21Q969T3 373 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 CHMP4CQ96CF2 233 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 ZSCAN31Q96LW9 406 aaPredicted RBP10.83□□□□□ -0.68
ATF3-210ENST00000613104 LZTS2Q9BRK4 669 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 ASCC2Q9H1I8 757 aaPredicted RBP10.83□□□□□ -0.68
ATF3-210ENST00000613104 FBXO28Q9NVF7 368 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 PPP1R9AQ9ULJ8 1098 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 ADAMTS5Q9UNA0 930 aa10.83□□□□□ -0.68
ATF3-210ENST00000613104 COL11A1P12107 1806 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 CCDC196A0A1B0GTZ2 297 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 SPDYE16A6NNV3 312 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 FLOT1O75955 427 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 CCT2P78371 535 aaKnown RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 IRX3P78415 501 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 SCRN1Q12765 414 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 SLC35G1Q2M3R5 365 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 TMTC3Q6ZXV5 915 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 NOL8Q76FK4 1167 aaKnown RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 MTMR8Q96EF0 704 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 PARK7Q99497 189 aaKnown RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 P2RX7Q99572 595 aaKnown RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 SLF1Q9BQI6 1058 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 UBA5Q9GZZ9 404 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 RIOX1Q9H6W3 641 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 HOXC10Q9NYD6 342 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
ATF3-210ENST00000613104 ADGRA2Q96PE1 1338 aa10.82□□□□□ -0.68
ATF3-210ENST00000613104 CYTH3O43739 400 aa10.81□□□□□ -0.68
ATF3-210ENST00000613104 PLEKHA8P1O95397 391 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms