RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 EHMT1Q9H9B1 1298 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 ZBED4O75132 1171 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 DCCP43146 1447 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 GOLGA8FQ08AF8 430 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 GOLGA8DPQ0D2H9 430 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 GGA3Q9NZ52 723 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.16□□□□□ -0.46
FAM3A-221ENST00000612856 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
FAM3A-221ENST00000612856 PPARDQ03181 441 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 ARID5AQ03989 594 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 SCRN1Q12765 414 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 NR5A1Q13285 461 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 PRR16Q569H4 304 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 MTIF2P46199 727 aaKnown RBP12.15□□□□□ -0.46
FAM3A-221ENST00000612856 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 GIMAP7Q8NHV1 300 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 CCDC40Q4G0X9 1142 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 TEX2Q8IWB9 1127 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 DEXIO95424 95 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 IGBP1P78318 339 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 GLG1Q92896 1179 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 PIGSQ96S52 555 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
FAM3A-221ENST00000612856 DCP1AQ9NPI6 582 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-221ENST00000612856 COBLO75128 1261 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 NFIAQ12857 509 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 KIF4BQ2VIQ3 1234 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 APOA5Q6Q788 366 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 GDAP1L1Q96MZ0 367 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 ERLIN1O75477 346 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 MTFR1LQ9H019 292 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 IVLP07476 585 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 TOP1P11387 765 aaKnown RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 PPP2R3AQ06190 1150 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 LEO1Q8WVC0 666 aaPredicted RBP12.14□□□□□ -0.47
FAM3A-221ENST00000612856 PSTPIP2Q9H939 334 aa12.14□□□□□ -0.47
FAM3A-221ENST00000612856 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 UBE2SQ16763 222 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 POLR2DO15514 142 aaKnown RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 CCP110O43303 1012 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 DNAJC21Q5F1R6 531 aaKnown RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 TPH2Q8IWU9 490 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 SRGNP10124 158 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 LIG3P49916 1009 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ADCY7P51828 1080 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
FAM3A-221ENST00000612856 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-221ENST00000612856 PLCD1P51178 756 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 ABCC12Q96J65 1359 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 EIF2AK2P19525 551 aaKnown RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 NBPF9Q3BBW0 867 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms