RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 GRXCR1A8MXD5 290 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 CDK8P49336 464 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 TMEM240Q5SV17 173 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 AKNAD1Q5T1N1 836 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 PSRC1Q6PGN9 363 aaPredicted RBP20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 TMEM199Q8N511 208 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 KLHDC9Q8NEP7 349 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 ADAMTS19Q8TE59 1207 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 VTI1AQ96AJ9 217 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 ATP8A2Q9NTI2 1148 aa20.73■□□□□ 0.91
CSNK1E-215ENST00000612795 TCF20Q9UGU0 1960 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 NCOR1O75376 2440 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 MBD4O95243 580 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 CSF2RAP15509 400 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 SNRNP48Q6IEG0 339 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 CEP85Q6P2H3 762 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 PCSK9Q8NBP7 692 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 DDRGK1Q96HY6 314 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 ASB2Q96Q27 587 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 PPP1R12CQ9BZL4 782 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 KANSL2Q9H9L4 492 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 RAPGEFL1Q9UHV5 662 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 ELP1O95163 1332 aa20.72■□□□□ 0.91
CSNK1E-215ENST00000612795 CYP2D7A0A087X1C5 515 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 TLR3O15455 904 aaKnown RBP20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 PRKAB2O43741 272 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 RAB30Q15771 203 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 CCDC85BQ15834 202 aaPredicted RBP20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 REPS2Q8NFH8 660 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 TEX13BQ9BXU2 312 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 MSRAQ9UJ68 235 aa20.71■□□□□ 0.91
CSNK1E-215ENST00000612795 A0A0U1RQG5 324 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 SNAI1O95863 264 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 ASGR1P07306 291 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 ACRP10323 421 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 IGFBP4P22692 258 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 CST5P28325 142 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 MRPS5P82675 430 aaKnown RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 C12orf60Q5U649 245 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 CCSAPQ6IQ19 270 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 C16orf86Q6ZW13 317 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 C16orf59Q7L2K0 433 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 UHRF1Q96T88 793 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 MTIF3Q9H2K0 278 aaKnown RBP20.7■□□□□ 0.9
CSNK1E-215ENST00000612795 USP17L12C9JPN9 530 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 USP17L21D6R901 530 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 SLC4A3P48751 1232 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 RASIP1Q5U651 963 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 MAMDC4Q6UXC1 1216 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 ZNF365Q70YC5 407 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 CLASRPQ8N2M8 674 aaKnown RBP20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 RHPN1Q8TCX5 695 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 CTDP1Q9Y5B0 961 aaPredicted RBP20.69■□□□□ 0.9
CSNK1E-215ENST00000612795 SMIM22K7EJ46 135 aa20.68■□□□□ 0.9
CSNK1E-215ENST00000612795 ARVCFO00192 962 aa20.68■□□□□ 0.9
CSNK1E-215ENST00000612795 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
CSNK1E-215ENST00000612795 ACVR2BQ13705 512 aa20.68■□□□□ 0.9
CSNK1E-215ENST00000612795 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■■□□□ 13.1
CSNK1E-215ENST00000612795 ADD2P35612 726 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 CDK7P50613 346 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 IRX5P78411 483 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 ADGRE1Q14246 886 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 GNASQ5JWF2 1037 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 ZNF467Q7Z7K2 595 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 FAM126BQ8IXS8 530 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 NUP88Q99567 741 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 ABHD16BQ9H3Z7 469 aa20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-215ENST00000612795 DNAJC25-GNG10A0A024R161 153 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 RLBP1P12271 317 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 CCDC144BQ3MJ40 725 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 CPXCR1Q8N123 301 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 UPF3AQ9H1J1 476 aaKnown RBP20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 TSPYL2Q9H2G4 693 aaPredicted RBP20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 NKX2-4Q9H2Z4 354 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 SLC28A3Q9HAS3 691 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 IL23AQ9NPF7 189 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 PAG1Q9NWQ8 432 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 RIPK3Q9Y572 518 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 LRRC37A2A6NM11 1700 aa20.66■□□□□ 0.9
CSNK1E-215ENST00000612795 ADCY6O43306 1168 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 CYP2C18P33260 490 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 PLA2G5P39877 138 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 GJA9P57773 515 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 ANKRD35Q8N283 1001 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 HERVK_113Q902F9 699 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 KIF1BPQ96EK5 621 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 SLC4A4Q9Y6R1 1079 aa20.65■□□□□ 0.9
CSNK1E-215ENST00000612795 ZBED4O75132 1171 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms