RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ANKRD33Q7Z3H0 272 aa28.2■■■□□ 2.1
MMP28-203ENST00000612672 HAUS7Q99871 368 aa28.2■■■□□ 2.1
MMP28-203ENST00000612672 KANSL2Q9H9L4 492 aa28.2■■■□□ 2.1
MMP28-203ENST00000612672 SLC4A4Q9Y6R1 1079 aa28.2■■■□□ 2.1
MMP28-203ENST00000612672 DNAJB2P25686 324 aa28.19■■■□□ 2.1
MMP28-203ENST00000612672 FGD4Q96M96 766 aa28.19■■■□□ 2.1
MMP28-203ENST00000612672 GOPCQ9HD26 462 aa28.19■■■□□ 2.1
MMP28-203ENST00000612672 GBF1Q92538 1859 aa28.19■■■□□ 2.1
MMP28-203ENST00000612672 TMEM265A0A087WTH1 108 aa28.18■■■□□ 2.1
MMP28-203ENST00000612672 STARD7Q9NQZ5 370 aa28.18■■■□□ 2.1
MMP28-203ENST00000612672 TBX21Q9UL17 535 aa28.18■■■□□ 2.1
MMP28-203ENST00000612672 DNAJC25-GNG10A0A024R161 153 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 UBE3CQ15386 1083 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 KCNA10Q16322 511 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 SNRNP48Q6IEG0 339 aaKnown RBP28.17■■■□□ 2.1
MMP28-203ENST00000612672 C16orf59Q7L2K0 433 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 STK11IPQ8N1F8 1099 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.17■■■□□ 2.1
MMP28-203ENST00000612672 TSEN34Q9BSV6 310 aaKnown RBP28.17■■■□□ 2.1
MMP28-203ENST00000612672 XIRP2A4UGR9 3374 aa28.17■■■□□ 2.1
MMP28-203ENST00000612672 LRRC37A2A6NM11 1700 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 RASA1P20936 1047 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 TOX2Q96NM4 488 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 SLF1Q9BQI6 1058 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 PRDM6Q9NQX0 595 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 ZHX1Q9UKY1 873 aaPredicted RBP28.16■■■□□ 2.1
MMP28-203ENST00000612672 CNPY2Q9Y2B0 182 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 SYNGAP1Q96PV0 1343 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 MYO9BQ13459 2157 aa28.16■■■□□ 2.1
MMP28-203ENST00000612672 MAMDC4Q6UXC1 1216 aa28.15■■■□□ 2.1
MMP28-203ENST00000612672 RPAP2Q8IXW5 612 aaPredicted RBP28.15■■■□□ 2.1
MMP28-203ENST00000612672 TEX13BQ9BXU2 312 aa28.15■■■□□ 2.1
MMP28-203ENST00000612672 ZBTB40Q9NUA8 1239 aa28.15■■■□□ 2.1
MMP28-203ENST00000612672 NDUFB10O96000 172 aa28.14■■■□□ 2.1
MMP28-203ENST00000612672 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.14■■■□□ 2.1
MMP28-203ENST00000612672 GRXCR1A8MXD5 290 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 TIMP1P01033 207 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 COPB2P35606 906 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 PBX2P40425 430 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 AMOTL1Q8IY63 956 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 FAM184BQ9ULE4 1060 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 COG6Q9Y2V7 657 aa28.13■■■□□ 2.09
MMP28-203ENST00000612672 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.12■■■□□ 2.09
MMP28-203ENST00000612672 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.12■■■□□ 2.09
MMP28-203ENST00000612672 MOXD2PA6NHM9 499 aa28.12■■■□□ 2.09
MMP28-203ENST00000612672 DCDC2CA8MYV0 355 aa28.12■■■□□ 2.09
MMP28-203ENST00000612672 RAB11FIP3O75154 756 aa28.12■■■□□ 2.09
MMP28-203ENST00000612672 CDK7P50613 346 aa28.12■■■□□ 2.09
MMP28-203ENST00000612672 MSL3Q8N5Y2 521 aaKnown RBP28.12■■■□□ 2.09
MMP28-203ENST00000612672 ZNF576Q9H609 170 aa28.12■■■□□ 2.09
MMP28-203ENST00000612672 IGKV6D-41A0A0C4DH26 115 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 F5H6K3 240 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 CTAGE5O15320 804 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 DUSP11O75319 330 aaKnown RBP28.11■■■□□ 2.09
MMP28-203ENST00000612672 CST5P28325 142 aaPredicted RBP28.11■■■□□ 2.09
MMP28-203ENST00000612672 SLC4A3P48751 1232 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 KLRC3Q07444 240 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 TMEM240Q5SV17 173 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 NUP133Q8WUM0 1156 aa28.11■■■□□ 2.09
MMP28-203ENST00000612672 STRBPQ96SI9 672 aaKnown RBP28.11■■■□□ 2.09
MMP28-203ENST00000612672 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.11■■■□□ 2.09
MMP28-203ENST00000612672 ARPP21Q9UBL0 812 aaPredicted RBP28.11■■■□□ 2.09
MMP28-203ENST00000612672 GSG1L2A8MUP6 293 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 SMARCA5O60264 1052 aaPredicted RBP28.1■■■□□ 2.09
MMP28-203ENST00000612672 HMMRO75330 724 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 ASGR1P07306 291 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 RASIP1Q5U651 963 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 MFSD5Q6N075 450 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 CPXCR1Q8N123 301 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 TIFAQ96CG3 184 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 PBX4Q9BYU1 374 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 KATNBL1Q9H079 304 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 UPF3AQ9H1J1 476 aaKnown RBP28.1■■■□□ 2.09
MMP28-203ENST00000612672 RAVER2Q9HCJ3 691 aaKnown RBP28.1■■■□□ 2.09
MMP28-203ENST00000612672 EPB41L4AQ9HCS5 686 aaPredicted RBP28.1■■■□□ 2.09
MMP28-203ENST00000612672 NYAP2Q9P242 653 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 LCTP09848 1927 aa28.1■■■□□ 2.09
MMP28-203ENST00000612672 C6orf222P0C671 652 aaPredicted RBP28.09■■■□□ 2.09
MMP28-203ENST00000612672 ACVR2BQ13705 512 aa28.09■■■□□ 2.09
MMP28-203ENST00000612672 SBK1Q52WX2 424 aa28.09■■■□□ 2.09
MMP28-203ENST00000612672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.09■■■□□ 2.09
MMP28-203ENST00000612672 DDX11Q96FC9 970 aa28.09■■■□□ 2.09
MMP28-203ENST00000612672 ATP2A1O14983 1001 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 ACRP10323 421 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 CSF2RAP15509 400 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 PTGS1P23219 599 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 CCDC144BQ3MJ40 725 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 ZNF467Q7Z7K2 595 aaPredicted RBP28.08■■■□□ 2.09
MMP28-203ENST00000612672 DDRGK1Q96HY6 314 aa28.08■■■□□ 2.09
MMP28-203ENST00000612672 BDP1A6H8Y1 2624 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 TRANK1O15050 2925 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 FAM126BQ8IXS8 530 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 PRPF38AQ8NAV1 312 aaKnown RBP28.07■■■□□ 2.08
MMP28-203ENST00000612672 OSBP2Q969R2 916 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 KIFC2Q96AC6 838 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 PPP1R12CQ9BZL4 782 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 SLC38A10Q9HBR0 1119 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 ASTN1O14525 1302 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 ELP1O95163 1332 aa28.07■■■□□ 2.08
MMP28-203ENST00000612672 PRDM1O75626 825 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms