RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ZNF536O15090 1300 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 TSPY2A6NKD2 308 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 RGS2P41220 211 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
SNCA-212ENST00000611107 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 GMCL1P1Q8NEA9 526 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 STAG1Q8WVM7 1258 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 SLF1Q9BQI6 1058 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 DSCC1Q9BVC3 393 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
SNCA-212ENST00000611107 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 HOXC6P09630 235 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 ZKSCAN1P17029 563 aaPredicted RBP10.24□□□□□ -0.77
SNCA-212ENST00000611107 SLC16A2P36021 539 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 STAT3P40763 770 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 AKNAD1Q5T1N1 836 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 STOX1Q6ZVD7 989 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 CPXCR1Q8N123 301 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 RUFY2Q8WXA3 655 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 SOCS4Q8WXH5 440 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 PAWRQ96IZ0 340 aaKnown RBP10.24□□□□□ -0.77
SNCA-212ENST00000611107 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 STX8Q9UNK0 236 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
SNCA-212ENST00000611107 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 TRIOBPQ9H2D6 2365 aa10.24□□□□□ -0.77
SNCA-212ENST00000611107 B4E1Z4 1266 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 FARP2O94887 1054 aaPredicted RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 TFRCP02786 760 aaKnown RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 BMP3P12645 472 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 CYBAP13498 195 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 PTGS1P23219 599 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 CCNA1P78396 465 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 MB21D1Q8N884 522 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 MAML3Q96JK9 1138 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
SNCA-212ENST00000611107 SLC38A10Q9HBR0 1119 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 TOMM22Q9NS69 142 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 ASTN1O14525 1302 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 PFASO15067 1338 aa10.23□□□□□ -0.77
SNCA-212ENST00000611107 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 DNAJC25-GNG10A0A024R161 153 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 H0YGN5 161 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 ADCY6O43306 1168 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 KDM4AO75164 1064 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 SLC3A2P08195 630 aaKnown RBP10.22□□□□□ -0.77
SNCA-212ENST00000611107 SLC35G1Q2M3R5 365 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 SNRNP48Q6IEG0 339 aaKnown RBP10.22□□□□□ -0.77
SNCA-212ENST00000611107 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 CCAR1Q8IX12 1150 aaKnown RBP10.22□□□□□ -0.77
SNCA-212ENST00000611107 PRPF38AQ8NAV1 312 aaKnown RBP10.22□□□□□ -0.77
SNCA-212ENST00000611107 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
SNCA-212ENST00000611107 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 OGDHLQ9ULD0 1010 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
SNCA-212ENST00000611107 CYP21A2P08686 494 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 PDHBP11177 359 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 SLC1A4P43007 532 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
SNCA-212ENST00000611107 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 DPP9Q86TI2 863 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 MMP19Q99542 508 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 MROH8Q9H579 483 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 ZNF287Q9HBT7 754 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 CWC22Q9HCG8 908 aaKnown RBP10.21□□□□□ -0.77
SNCA-212ENST00000611107 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
SNCA-212ENST00000611107 HOMER2Q9NSB8 354 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 FEM1BQ9UK73 627 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 RBM8AQ9Y5S9 174 aaKnown RBP10.21□□□□□ -0.77
SNCA-212ENST00000611107 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
SNCA-212ENST00000611107 SOWAHBA6NEL2 793 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 ZNF213O14771 459 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 STRNO43815 780 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 SLC25A27O95847 323 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 SNAI1O95863 264 aaPredicted RBP10.2□□□□□ -0.78
SNCA-212ENST00000611107 SNHG28P0DPA3 235 aa10.2□□□□□ -0.78
SNCA-212ENST00000611107 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
SNCA-212ENST00000611107 COL6A1P12109 1028 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms