RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SLC35G1Q2M3R5 365 aa13.58□□□□□ -0.24
USP6NL-206ENST00000609853 ISM2Q6H9L7 571 aa13.58□□□□□ -0.24
USP6NL-206ENST00000609853 FILIP1Q7Z7B0 1213 aa13.58□□□□□ -0.24
USP6NL-206ENST00000609853 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP6NL-206ENST00000609853 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
USP6NL-206ENST00000609853 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
USP6NL-206ENST00000609853 WNT7AO00755 349 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 TTLL1O95922 423 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 SERPINC1P01008 464 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 KCNJ6P48051 423 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 NAPAP54920 295 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 UBASH3AP57075 661 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 LRMPQ12912 555 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 PICALMQ13492 652 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
USP6NL-206ENST00000609853 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 APOBEC3HQ6NTF7 200 aaKnown RBP13.57□□□□□ -0.24
USP6NL-206ENST00000609853 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
USP6NL-206ENST00000609853 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
USP6NL-206ENST00000609853 MYL1P05976 194 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 PDHBP11177 359 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 SKILP12757 684 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 DPYDQ12882 1025 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 E2F4Q16254 413 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 TYW1BQ6NUM6 668 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 AK8Q96MA6 479 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 A0A087X0B3 334 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-206ENST00000609853 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 CRKP46108 304 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 NONOQ15233 471 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP6NL-206ENST00000609853 PPP1R18Q6NYC8 613 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-206ENST00000609853 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 DDX4Q9NQI0 724 aaKnown RBP13.56□□□□□ -0.24
USP6NL-206ENST00000609853 FANCLQ9NW38 375 aa13.56□□□□□ -0.24
USP6NL-206ENST00000609853 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-206ENST00000609853 ZNF18P17022 549 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
USP6NL-206ENST00000609853 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
USP6NL-206ENST00000609853 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 CUEDC2Q9H467 287 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 MAGEF1Q9HAY2 307 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
USP6NL-206ENST00000609853 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 USP17L5A8MUK1 530 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 ATP1A3P13637 1013 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 AKR1B1P15121 316 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 SHMT1P34896 483 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 AFMP43652 599 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 SCNN1DP51172 638 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 CCZ1BP86790 482 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 CCZ1P86791 482 aaPredicted RBP13.54□□□□□ -0.24
USP6NL-206ENST00000609853 IL17AQ16552 155 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 PDXDC2PQ6P474 469 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 GRAMD1CQ8IYS0 662 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
USP6NL-206ENST00000609853 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
USP6NL-206ENST00000609853 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-206ENST00000609853 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
USP6NL-206ENST00000609853 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 INF2Q27J81 1249 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 NEK8Q86SG6 692 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
USP6NL-206ENST00000609853 PIGSQ96S52 555 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 PI4KBQ9UBF8 816 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
USP6NL-206ENST00000609853 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 CCP110O43303 1012 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 ECE2O60344 883 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 TUBB4AP04350 444 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 UQCRHP07919 91 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP6NL-206ENST00000609853 UBA7P41226 1012 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
USP6NL-206ENST00000609853 GLT8D2Q9H1C3 349 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms