RNA–Protein interactions for RNA: ENST00000609038.1

AP000553.2-201, humanhuman

BASIC

Gene AP000553.2, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.2-201ENST00000609038 STK3Q13188 491 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 CATSPERGQ6ZRH7 1159 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 SRBD1Q8N5C6 995 aaKnown RBP15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 MS4A4AQ96JQ5 239 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 PNMA2Q9UL42 364 aa15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 NAP1L2Q9ULW6 460 aaPredicted RBP15.58■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L15C9J2P7 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L13C9JLJ4 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L11C9JVI0 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L18D6R9N7 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L22D6RA61 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L17D6RBQ6 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L19D6RCP7 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L20D6RJB6 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 hCG_1984214I3L0E3 225 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 CYTH3O43739 400 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 HMGCS2P54868 508 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 INHBEP58166 350 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 USP17L24Q0WX57 530 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 PABPC4Q13310 644 aaKnown RBP eCLIP15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 FAM83BQ5T0W9 1011 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 LBX2Q6XYB7 198 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 ZNF713Q8N859 430 aaPredicted RBP15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 WASF1Q92558 559 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 NCOA5Q9HCD5 579 aaKnown RBP15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 ADAMTS5Q9UNA0 930 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 AGTPBP1Q9UPW5 1226 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
AP000553.2-201ENST00000609038 MANSC4A6NHS7 340 aaPredicted RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 FAM155AB1AL88 458 aaPredicted RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 PLEKHA8P1O95397 391 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 DEXIO95424 95 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 ZNF157P51786 506 aaPredicted RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 SSRP1Q08945 709 aaKnown RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 CCDC96Q2M329 555 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 SLC35G1Q2M3R5 365 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 COL11A1P12107 1806 aaPredicted RBP15.56■□□□□ 0.08
AP000553.2-201ENST00000609038 THSD7BQ9C0I4 1608 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 FRMPD2Q68DX3 1309 aaPredicted RBP15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 PTPDC1A2A3K4 754 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 TMEM232C9JQI7 657 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 FDPSP14324 419 aaKnown RBP15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 TRAF1Q13077 416 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 SYDE2Q5VT97 1194 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 GPAT2Q6NUI2 795 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 KCTD1Q719H9 257 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 SPICE1Q8N0Z3 855 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 GTF3C2Q8WUA4 911 aaPredicted RBP15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 SLF1Q9BQI6 1058 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 MAF1Q9H063 256 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 RANBP17Q9H2T7 1088 aaKnown RBP15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 RPAP3Q9H6T3 665 aaPredicted RBP15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 HOXC10Q9NYD6 342 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 SMC3Q9UQE7 1217 aa15.55■□□□□ 0.08
AP000553.2-201ENST00000609038 ATP2A1O14983 1001 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 DDIT3P35638 169 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 OAZ1P54368 228 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 AKAP17AQ02040 695 aaKnown RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 COG2Q14746 738 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 ZYXQ15942 572 aaKnown RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 PFKFB3Q16875 520 aaPredicted RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 ADGRF4Q8IZF3 695 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 JMJD4Q9H9V9 463 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 GPCPD1Q9NPB8 672 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 SH3GLB2Q9NR46 395 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 ORC3Q9UBD5 711 aaPredicted RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 PRR12Q9ULL5 1215 aa15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 ABT1Q9ULW3 272 aaKnown RBP15.54■□□□□ 0.08
AP000553.2-201ENST00000609038 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 ZBTB5O15062 677 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 PDCP20941 246 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 PKN1Q16512 942 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 SLC26A6Q9BXS9 759 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 SLC38A10Q9HBR0 1119 aa15.53■□□□□ 0.08
AP000553.2-201ENST00000609038 CCL15-CCL14A0A0B4J2E2 113 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 JAK2O60674 1132 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 SCG2P13521 617 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 OSBPP22059 807 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 GJB2P29033 226 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 TM4SF4P48230 202 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 CCL15Q16663 113 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 DEFB115Q30KQ5 88 aa15.52■□□□□ 0.08
AP000553.2-201ENST00000609038 TREML2Q5T2D2 321 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms