RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
CTSA-218ENST00000607814 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
CTSA-218ENST00000607814 FOXP2O15409 715 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 COBLO75128 1261 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
CTSA-218ENST00000607814 RAG1P15918 1043 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 COL9A1P20849 921 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
CTSA-218ENST00000607814 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 RNF180Q86T96 592 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 MAML3Q96JK9 1138 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 ARPP21Q9UBL0 812 aaPredicted RBP16.23■□□□□ 0.19
CTSA-218ENST00000607814 ROBO3Q96MS0 1386 aa16.23■□□□□ 0.19
CTSA-218ENST00000607814 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 RARBP10826 455 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 GNAT2P19087 354 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 DNAJB2P25686 324 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 FPGSQ05932 587 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
CTSA-218ENST00000607814 GRIN2CQ14957 1233 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 TMEM179Q6ZVK1 233 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 TOX2Q96NM4 488 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTSA-218ENST00000607814 MKNK2Q9HBH9 465 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 XPNPEP3Q9NQH7 507 aa16.22■□□□□ 0.19
CTSA-218ENST00000607814 FCER1AP12319 257 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 RASA1P20936 1047 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 ITGB8P26012 769 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 ICA1Q05084 483 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 CTDSPL2Q05D32 466 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
CTSA-218ENST00000607814 ZNF589Q86UQ0 364 aaPredicted RBP16.21■□□□□ 0.19
CTSA-218ENST00000607814 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
CTSA-218ENST00000607814 TANGO6Q9C0B7 1094 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 NAPBQ9H115 298 aa16.21■□□□□ 0.19
CTSA-218ENST00000607814 RAD21O60216 631 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 SLC25A27O95847 323 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
CTSA-218ENST00000607814 DSG3P32926 999 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 EPHB4P54760 987 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 GIMAP6Q6P9H5 292 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 SKAP1Q86WV1 359 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 TSEN34Q9BSV6 310 aaKnown RBP16.2■□□□□ 0.18
CTSA-218ENST00000607814 ZNF576Q9H609 170 aa16.2■□□□□ 0.18
CTSA-218ENST00000607814 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
CTSA-218ENST00000607814 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
CTSA-218ENST00000607814 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 SDSP20132 328 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 NCAPG2Q86XI2 1143 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 USP38Q8NB14 1042 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 TIFAQ96CG3 184 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 CCDC17Q96LX7 622 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 NACAP1Q9BZK3 213 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 OSBPL3Q9H4L5 887 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
CTSA-218ENST00000607814 MYH8P13535 1937 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 PQBP1O60828 265 aaKnown RBP16.18■□□□□ 0.18
CTSA-218ENST00000607814 PPARAQ07869 468 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 PLS1Q14651 629 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
CTSA-218ENST00000607814 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
CTSA-218ENST00000607814 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
CTSA-218ENST00000607814 TINF2Q9BSI4 451 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 ARHGEF10LQ9HCE6 1279 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 MYO9BQ13459 2157 aa16.18■□□□□ 0.18
CTSA-218ENST00000607814 FLOT1O75955 427 aa16.17■□□□□ 0.18
CTSA-218ENST00000607814 AKR1A1P14550 325 aa16.17■□□□□ 0.18
CTSA-218ENST00000607814 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
CTSA-218ENST00000607814 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
CTSA-218ENST00000607814 KANSL2Q9H9L4 492 aa16.17■□□□□ 0.18
CTSA-218ENST00000607814 TMX2Q9Y320 296 aa16.17■□□□□ 0.18
CTSA-218ENST00000607814 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
CTSA-218ENST00000607814 MOXD2PA6NHM9 499 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 PGK1P00558 417 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 TIMP1P01033 207 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
CTSA-218ENST00000607814 COPB2P35606 906 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 HAND2P61296 217 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
CTSA-218ENST00000607814 ASB2Q96Q27 587 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
CTSA-218ENST00000607814 VCPKMTQ9H867 229 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 CHD7Q9P2D1 2997 aa16.16■□□□□ 0.18
CTSA-218ENST00000607814 MROH7Q68CQ1 1323 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms