RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CCL14Q16627 93 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 NCAPG2Q86XI2 1143 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 DGKHQ86XP1 1220 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 ANKS1AQ92625 1134 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 ZSCAN10Q96SZ4 725 aaPredicted RBP15.07■□□□□ 0
SHROOM1-207ENST00000606676 UNC93B1Q9H1C4 597 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 CNNM2Q9H8M5 875 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 MTMR7Q9Y216 660 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 RIPK3Q9Y572 518 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 RBM8AQ9Y5S9 174 aaKnown RBP15.07■□□□□ 0
SHROOM1-207ENST00000606676 IVNS1ABPQ9Y6Y0 642 aa15.07■□□□□ 0
SHROOM1-207ENST00000606676 KIAA0100Q14667 2235 aaKnown RBP15.07■□□□□ 0
SHROOM1-207ENST00000606676 COBLO75128 1261 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 ZBED4O75132 1171 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 IGHA2P01877 340 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 SNHG28P0DPA3 235 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 ADORA2AP29274 412 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 STAT2P52630 851 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 MAP3K21Q5TCX8 1036 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 STOX1Q6ZVD7 989 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 CYB5R4Q7L1T6 521 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 IQCA1Q86XH1 822 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 ENAHQ8N8S7 591 aaPredicted RBP15.06■□□□□ 0
SHROOM1-207ENST00000606676 NPLOC4Q8TAT6 608 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 DCAF4Q8WV16 495 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 APBA2Q99767 749 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 TEX13BQ9BXU2 312 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 RNF208Q9H0X6 261 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 FLRT1Q9NZU1 646 aa15.06■□□□□ 0
SHROOM1-207ENST00000606676 E7EWF7 191 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 GJB1P08034 283 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 PDHBP11177 359 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 MLLT1Q03111 559 aaPredicted RBP15.05■□□□□ -0
SHROOM1-207ENST00000606676 CCDC178Q5BJE1 867 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 SNRNP48Q6IEG0 339 aaKnown RBP15.05■□□□□ -0
SHROOM1-207ENST00000606676 TTBK2Q6IQ55 1244 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 BTNL9Q6UXG8 535 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 KIAA1211Q6ZU35 1233 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 FAM160B2Q86V87 743 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 TRMT44Q8IYL2 757 aaKnown RBP15.05■□□□□ -0
SHROOM1-207ENST00000606676 ABRAQ8N0Z2 381 aa15.05■□□□□ -0
SHROOM1-207ENST00000606676 RAVER2Q9HCJ3 691 aaKnown RBP15.05■□□□□ -0
SHROOM1-207ENST00000606676 COL11A1P12107 1806 aaPredicted RBP15.04■□□□□ -0
SHROOM1-207ENST00000606676 ZNF536O15090 1300 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 TNKSO95271 1327 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 CDC45O75419 566 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 FDX1P10109 184 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 FCER1AP12319 257 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
SHROOM1-207ENST00000606676 NECTIN1Q15223 517 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 CCDC96Q2M329 555 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 CPXCR1Q8N123 301 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 SHISA4Q96DD7 197 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 PAK6Q9NQU5 681 aaPredicted RBP15.04■□□□□ -0
SHROOM1-207ENST00000606676 PRR12Q9ULL5 1215 aa15.04■□□□□ -0
SHROOM1-207ENST00000606676 ISY1Q9ULR0 285 aaKnown RBP15.04■□□□□ -0
SHROOM1-207ENST00000606676 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
SHROOM1-207ENST00000606676 FRMPD2Q68DX3 1309 aaPredicted RBP15.03■□□□□ -0
SHROOM1-207ENST00000606676 RPTORQ8N122 1335 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
SHROOM1-207ENST00000606676 COPB2P35606 906 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 SLC16A2P36021 539 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 GJA8P48165 433 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 OAZ1P54368 228 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 SNAP25P60880 206 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 CACNB2Q08289 660 aaPredicted RBP15.03■□□□□ -0
SHROOM1-207ENST00000606676 ZNF543Q08ER8 600 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 TRDNQ13061 729 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
SHROOM1-207ENST00000606676 SEC23AQ15436 765 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 DPP9Q86TI2 863 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 PNMA1Q8ND90 353 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 GPCPD1Q9NPB8 672 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 ANO2Q9NQ90 1003 aa15.03■□□□□ -0
SHROOM1-207ENST00000606676 ZNF236Q9UL36 1845 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 SLC27A2O14975 620 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 SGPL1O95470 568 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 COL9A3Q14050 684 aaPredicted RBP15.02■□□□□ -0
SHROOM1-207ENST00000606676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.02■□□□□ -0
SHROOM1-207ENST00000606676 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
SHROOM1-207ENST00000606676 AGBL1Q96MI9 1066 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 DEFB118Q96PH6 123 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 MMP19Q99542 508 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 UBAC1Q9BSL1 405 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02■□□□□ -0
SHROOM1-207ENST00000606676 KAT14Q9H8E8 782 aa15.02■□□□□ -0
SHROOM1-207ENST00000606676 CTDP1Q9Y5B0 961 aaPredicted RBP15.02■□□□□ -0
SHROOM1-207ENST00000606676 PGK2P07205 417 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 GOLGA8HP0CJ92 632 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 CYP2C19P33261 490 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 ANTXR2P58335 489 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 ZNF792Q3KQV3 632 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 SYDE2Q5VT97 1194 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 OLFML2BQ68BL8 750 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 CREB3L3Q68CJ9 461 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 CHST3Q7LGC8 479 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 MB21D2Q8IYB1 491 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 NCOA7Q8NI08 942 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms