RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	KDM2B	Q8NHM5	1336 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	PDE1B	Q01064	536 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	IL9R	Q01113	521 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	UIMC1	Q96RL1	719 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	ADPGK	Q9BRR6	497 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216		A6NJR5	290 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	GNPTAB	Q3T906	1256 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	NFATC2IP	Q8NCF5	419 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	APPBP2	Q92624	585 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	EFHD1	Q9BUP0	239 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	NCOA5	Q9HCD5	579 aa	Known RBP	18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	ZC4H2	Q9NQZ6	224 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216		H0YCG3	227 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	LRCH2	Q5VUJ6	765 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	PASK	Q96RG2	1323 aa		18.71	■□□□□ 0.59
ZSWIM8-223	ENST00000605216	SUN1	O94901	812 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	INHBA	P08476	426 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TRIM42	Q8IWZ5	723 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PNMA2	Q9UL42	364 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	WDR7	Q9Y4E6	1490 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TCIRG1	Q13488	830 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TMTC3	Q6ZXV5	915 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	MYLK4	Q86YV6	388 aa	Predicted RBP	18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	MLXIP	Q9HAP2	919 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216		H7C0C1	242 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ATP5O	P48047	213 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	FAM47C	Q5HY64	1035 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	GPBP1	Q86WP2	473 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TRMT44	Q8IYL2	757 aa	Known RBP	18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	MYOCD	Q8IZQ8	938 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	FAM170A	A1A519	330 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PRDM1	O75626	825 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ITGA6	P23229	1130 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	NOP14	P78316	857 aa	Known RBP	18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	OR8K1	Q8NGG5	319 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	CCPG1	Q9ULG6	757 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ZNF148	Q9UQR1	794 aa		18.7	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	EEF1G	P26641	437 aa	Known RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	APBA1	Q02410	837 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	RCN2	Q14257	317 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	C8orf34	Q49A92	452 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KRT40	Q6A162	431 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SUFU	Q9UMX1	484 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KCNJ18	B7U540	433 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	EYA2	O00167	538 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	GNPAT	O15228	680 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KCNJ12	Q14500	433 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PARP10	Q53GL7	1025 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	REXO1	Q8N1G1	1221 aa	Known RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PGBD1	Q96JS3	809 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	MYCBP	Q99417	103 aa	Predicted RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	MAP7D3	Q8IWC1	876 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TPCN1	Q9ULQ1	816 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TYW5	A2RUC4	315 aa	Known RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	EIF3CL	B5ME19	914 aa	Known RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	BUB1	O43683	1085 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PDE6B	P35913	854 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	BCAS4	Q8TDM0	211 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	EIF3C	Q99613	913 aa	Known RBP	18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TEKT2	Q9UIF3	430 aa		18.69	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KDR	P35968	1356 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	GPAA1	O43292	621 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TNNI3K	Q59H18	835 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	RPAIN	Q86UA6	219 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	FPGT-TNNI3K	V9GXZ4	949 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ADK	P55263	362 aa	Known RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KAZN	Q674X7	775 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	OTUD7B	Q6GQQ9	843 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	RLBP1	P12271	317 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	EEF1D	P29692	281 aa	Known RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	LIG3	P49916	1009 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TAB3	Q8N5C8	712 aa	Predicted RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	UHMK1	Q8TAS1	419 aa	Known RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	CTDSPL2	Q05D32	466 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SCIN	Q9Y6U3	715 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	HEXIM1	O94992	359 aa	Known RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	LMNB2	Q03252	620 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	PRKG1	Q13976	671 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SUPT20H	Q8NEM7	779 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	RNF217	Q8TC41	542 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	XAGE2	Q96GT9	111 aa		18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.68	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	TCP1	P17987	556 aa	Known RBP	18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ARHGEF16	Q5VV41	709 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	FBXO41	Q8TF61	875 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	NOS1	P29475	1434 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SLC12A1	Q13621	1099 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	KSR1	Q8IVT5	923 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ANKRD35	Q8N283	1001 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	ATP8A2	Q9NTI2	1148 aa		18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.67	■□□□□ 0.58
ZSWIM8-223	ENST00000605216	IRAK4	Q9NWZ3	460 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms