RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 SNX12Q9UMY4 172 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 CAPN6Q9Y6Q1 641 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 DEXIO95424 95 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 ADD2P35612 726 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 LIFRP42702 1097 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 ZNF174Q15697 407 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 CEP85LQ5SZL2 805 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 MICALCLQ6ZW33 695 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 KRT26Q7Z3Y9 468 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 EPN3Q9H201 632 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 VCPKMTQ9H867 229 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 NHEJ1Q9H9Q4 299 aaPredicted RBP13.9□□□□□ -0.18
CDCA3-212ENST00000604599 CIAO1O76071 339 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 TRIM21P19474 475 aaKnown RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 KLK7P49862 253 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 NFRKBQ6P4R8 1299 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 MTRQ99707 1265 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 STIM2Q9P246 746 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 CAPN11Q9UMQ6 739 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 PRCPP42785 496 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC57Q2TAC2 916 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 PREPLQ4J6C6 727 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 ALS2CLQ60I27 953 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 CRACR2BQ8N4Y2 399 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 MIEF2Q96C03 454 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
CDCA3-212ENST00000604599 TACC3Q9Y6A5 838 aa13.89□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC181Q5TID7 509 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 MLXIPQ9HAP2 919 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 VEZTQ9HBM0 779 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 SLC40A1Q9NP59 571 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 B4DLN1 442 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 PRDM1O75626 825 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 PPP1R37O75864 691 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 GCP02774 474 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 CDR1P51861 262 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 SMTNP53814 917 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
CDCA3-212ENST00000604599 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 CCT8L2Q96SF2 557 aa13.88□□□□□ -0.19
CDCA3-212ENST00000604599 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
CDCA3-212ENST00000604599 ZSCAN5CA6NGD5 496 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF233A6NK53 670 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 A6NNZ2 444 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 RASSF9O75901 435 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PDHBP11177 359 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 NR1D1P20393 614 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PTGISQ16647 500 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 TUBB8Q3ZCM7 444 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 C8orf74Q6P047 294 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 KDM7AQ6ZMT4 941 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PIH1D3Q9NQM4 214 aaKnown RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 MYH6P13533 1939 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 SLIT3O75094 1523 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 E7EVH7 732 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 MOCS3O95396 460 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 MEA1Q16626 185 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 FAM153CQ494X1 144 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PCMTD1Q96MG8 357 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PURBQ96QR8 312 aaKnown RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF263O14978 683 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 WTAPQ15007 396 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 YTHDF3Q7Z739 585 aaKnown RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 NAPBQ9H115 298 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
CDCA3-212ENST00000604599 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-212ENST00000604599 ARHGAP23Q9P227 1491 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 NCK2O43639 380 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 HPDP32754 393 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms