RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CDK7P50613 346 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 TFF2Q03403 129 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SDR42E1Q8WUS8 393 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 FRAT1Q92837 279 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 VTI1AQ96AJ9 217 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SWAP70Q9UH65 585 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ZNF214Q9UL59 606 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 YBX2Q9Y2T7 364 aaKnown RBP14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 FOCADQ5VW36 1801 aa14.25□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 DUSP11O75319 330 aaKnown RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SNAI1O95863 264 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ASGR1P07306 291 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 BMP1P13497 986 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 PDE6AP16499 860 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CST5P28325 142 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CYP2C18P33260 490 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 COPB2P35606 906 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 FAM126BQ8IXS8 530 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 HERVK_113Q902F9 699 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 MTIF3Q9H2K0 278 aaKnown RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 IL23AQ9NPF7 189 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 DCP1AQ9NPI6 582 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 PPP1R9AQ9ULJ8 1098 aa14.24□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ARVCFO00192 962 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 TLR3O15455 904 aaKnown RBP14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ADCY6O43306 1168 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 RAD21O60216 631 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 KCNQ1P51787 676 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 LCORLQ8N3X6 602 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 PCSK9Q8NBP7 692 aaKnown RBP14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 REPS2Q8NFH8 660 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SPC25Q9HBM1 224 aa14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 NOP58Q9Y2X3 529 aaKnown RBP14.23□□□□□ -0.13
PDLIM1P1-201ENST00000604187 EEF2P13639 858 aaKnown RBP14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 RABGGTBP53611 331 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 PPP2R2DQ66LE6 453 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SNRNP48Q6IEG0 339 aaKnown RBP14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 OTOP2Q7RTS6 562 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 DDX11Q96FC9 970 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 HCN4Q9Y3Q4 1203 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CDK5RAP2Q96SN8 1893 aa14.22□□□□□ -0.13
PDLIM1P1-201ENST00000604187 UMODL1Q5DID0 1318 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ZNF532Q9HCE3 1301 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 SMIM22K7EJ46 135 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 FGBP02675 491 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 GJA9P57773 515 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ACVR2BQ13705 512 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 GNASQ5JWF2 1037 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 AACSQ86V21 672 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 TMEM57Q8N5G2 664 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CCDC17Q96LX7 622 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 UPF3AQ9H1J1 476 aaKnown RBP14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 ARMT1Q9H993 441 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.21□□□□□ -0.13
PDLIM1P1-201ENST00000604187 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 PRKAB2O43741 272 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CD4P01730 458 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 MYOGP15173 224 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SLC4A3P48751 1232 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 TTF1Q15361 905 aaPredicted RBP14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CCDC144BQ3MJ40 725 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 NUP88Q99567 741 aaPredicted RBP14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 RIPK3Q9Y572 518 aa14.2□□□□□ -0.14
PDLIM1P1-201ENST00000604187 DNAJC25-GNG10A0A024R161 153 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ERC2O15083 957 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CDK8P49336 464 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CCL23P55773 120 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SLF1Q9BQI6 1058 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 LRFN3Q9BTN0 628 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 EPHX3Q9H6B9 360 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
PDLIM1P1-201ENST00000604187 TRANK1O15050 2925 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ZBBXA8MT70 800 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 GOLIM4O00461 696 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CTAGE5O15320 804 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 MBD4O95243 580 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 BEX3Q00994 111 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CXCL17Q6UXB2 119 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 FGD4Q96M96 766 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 NOC4LQ9BVI4 516 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms