RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SLC10A5Q5PT55 438 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 NUGGCQ68CJ6 796 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 STRA8Q7Z7C7 330 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 NAT8LQ8N9F0 302 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 JAKMIP2Q96AA8 810 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 UROC1Q96N76 676 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 IRAK4Q9NWZ3 460 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 CHCHD3Q9NX63 227 aaKnown RBP5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 FAM53CQ9NYF3 392 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 CHMP5Q9NZZ3 219 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 GTF3C4Q9UKN8 822 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 PCDHB9Q9Y5E1 797 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 MAP3K1Q13233 1512 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 UBAP1LF5GYI3 381 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 SPTLC2O15270 562 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 KINO60870 393 aaKnown RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 SEPHS1P49903 392 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 ARID5BQ14865 1188 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 SART3Q15020 963 aaKnown RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 PLCB4Q15147 1175 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 RABEP1Q15276 862 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 PTPRNQ16849 979 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 NBPF8Q3BBV2 869 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 WWC2Q6AWC2 1192 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 CYP26C1Q6V0L0 522 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 NLRP13Q86W25 1043 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 TXLNBQ8N3L3 684 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 SMCR8Q8TEV9 937 aaPredicted RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 POF1BQ8WVV4 589 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 ZBTB10Q96DT7 871 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 PLEKHA5Q9HAU0 1116 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 OBP2AQ9NY56 170 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 RCAN3Q9UKA8 241 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 TLL2Q9Y6L7 1015 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 CDC42BPBQ9Y5S2 1711 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 LINC00854A0A1B0GVQ3 168 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 PDE8AO60658 829 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 IGHA2P01877 340 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 MYBP10242 640 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 STAT3P40763 770 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 EIF4G2P78344 907 aaKnown RBP eCLIP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC45A4Q5BKX6 768 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 AP1ARQ63HQ0 302 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 CATSPER4Q7RTX7 472 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 GALNT5Q7Z7M9 940 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 CRELD1Q96HD1 420 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 FANCFQ9NPI8 374 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 ZNF446Q9NWS9 450 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 DDX20Q9UHI6 824 aaKnown RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 AFG3L2Q9Y4W6 797 aa5.71□□□□□ -1.5
SPTBN1-206ENST00000602898 PTPN23Q9H3S7 1636 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 SPAG9O60271 1321 aaKnown RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 ROBO1Q9Y6N7 1651 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 SENP3-EIF4A1A0A087X0R7 540 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 RAC2P15153 192 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 CAPN3P20807 821 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PSMA3P25788 255 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 GALNSP34059 522 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 DSC3Q14574 896 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 HS2ST1Q7LGA3 356 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM74Q86UV6 250 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM73Q86UV7 250 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 C10orf67Q8IYJ2 551 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM26EQ8N5C1 309 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PJA1Q8NG27 643 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 POLR3CQ9BUI4 534 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 RHOBTB2Q9BYZ6 727 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 EFR3BQ9Y2G0 817 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 COL22A1Q8NFW1 1626 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PZPP20742 1482 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 NUP153P49790 1475 aaKnown RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 CROCC2H7BZ55 1655 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 TIAM1Q13009 1591 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 UGGT1Q9NYU2 1555 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 F5H423 210 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 TNFRSF21O75509 655 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 CD4P01730 458 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 APBA1Q02410 837 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 FKBP5Q13451 457 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 GALEQ14376 348 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 HIBCHQ6NVY1 386 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 CCDC81Q6ZN84 652 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM22Q8IYM9 498 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 VPS52Q8N1B4 723 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 LRGUKQ96M69 825 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 MMTAG2Q9BU76 263 aaKnown RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PRR14Q9BWN1 585 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 MARF1Q9Y4F3 1742 aaKnown RBP5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 KDM2BQ8NHM5 1336 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PLEKHG2Q9H7P9 1386 aa5.7□□□□□ -1.5
SPTBN1-206ENST00000602898 PNMA6FA0A0J9YX94 578 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 ARIH2O95376 493 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 KRT10P13645 584 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 STIP1P31948 543 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms