RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-216ENST00000602557 FLOT1O75955 427 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 SFMBT2Q5VUG0 894 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 PARP9Q8IXQ6 854 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 ACTR5Q9H9F9 607 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-216ENST00000602557 ARHGEF35A5YM69 484 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 MAP7D3Q8IWC1 876 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DAPK3O43293 454 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 TTLL11Q8NHH1 800 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 AOX1Q06278 1338 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 USH1GQ495M9 461 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DCUN1D2Q6PH85 259 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 ENC1O14682 589 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DNAJC6O75061 913 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DDB1Q16531 1140 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 CYTH2Q99418 400 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 SCP2P22307 547 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 TXKP42681 527 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 ADCY1Q08828 1119 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 ITGA6P23229 1130 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 MSH2P43246 934 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 INPP1P49441 399 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 SATB2Q9UPW6 733 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 A0A087WWV3 80 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 GCNT3O95395 438 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 MAGEA1P43355 309 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 ZNF449Q6P9G9 518 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 G2E3Q7L622 706 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 FAM207AQ9NSI2 230 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 KCNK3O14649 394 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 STRN3Q13033 797 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 SRGAP1Q7Z6B7 1085 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 CACTINQ8WUQ7 758 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 KIF9Q9HAQ2 790 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 ZCCHC17Q9NP64 241 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 PICK1Q9NRD5 415 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 TADA3O75528 432 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 MRPS25P82663 173 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 C2CD5Q86YS7 1000 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 MYO5CQ9NQX4 1742 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 MYCLP12524 364 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 PDCLQ13371 301 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 KIAA2013Q8IYS2 634 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 AFAP1L2Q8N4X5 818 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 KRT12Q99456 494 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
CSMD1-216ENST00000602557 ADAM21Q9UKJ8 722 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 BUB1O43683 1085 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 CCDC93Q567U6 631 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 SNX14Q9Y5W7 946 aa9.53□□□□□ -0.88
CSMD1-216ENST00000602557 PLXNC1O60486 1568 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-216ENST00000602557 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.88
CSMD1-216ENST00000602557 ADCY7P51828 1080 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 TIMM10P62072 90 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 XAGE2Q96GT9 111 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 HOMER3Q9NSC5 361 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 KCNJ14Q9UNX9 436 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 TSC22D4Q9Y3Q8 395 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.88
CSMD1-216ENST00000602557 RASSF10A6NK89 507 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 DEUP1Q05D60 604 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 HERC4Q5GLZ8 1057 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-216ENST00000602557 JDP2Q8WYK2 163 aa9.52□□□□□ -0.88
CSMD1-216ENST00000602557 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 TFCP2L1Q9NZI6 479 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ESRRGP62508 458 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ZYXQ15942 572 aaKnown RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 RRAGAQ7L523 313 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 COL17A1Q9UMD9 1497 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 PDE4DIPQ5VU43 2346 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 JAK2O60674 1132 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 S100BP04271 92 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 SYCE1Q8N0S2 351 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 KLHL29Q96CT2 875 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 EXOC7Q9UPT5 735 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 SLC35F6Q8N357 371 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 TRIM58Q8NG06 486 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms