RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 GRXCR1A8MXD5 290 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 CYP2D6P10635 497 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 CSF2RAP15509 400 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 IGFBP4P22692 258 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 AACSQ86V21 672 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 RAPGEFL1Q9UHV5 662 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 ZNF214Q9UL59 606 aaPredicted RBP17.14■□□□□ 0.33
HCG18-245ENST00000602550 ZNF532Q9HCE3 1301 aa17.14■□□□□ 0.33
HCG18-245ENST00000602550 A0A0U1RQG5 324 aaPredicted RBP17.13■□□□□ 0.33
HCG18-245ENST00000602550 ARVCFO00192 962 aa17.13■□□□□ 0.33
HCG18-245ENST00000602550 SNAI1O95863 264 aaPredicted RBP17.13■□□□□ 0.33
HCG18-245ENST00000602550 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
HCG18-245ENST00000602550 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
HCG18-245ENST00000602550 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
HCG18-245ENST00000602550 SLC28A3Q9HAS3 691 aa17.13■□□□□ 0.33
HCG18-245ENST00000602550 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
HCG18-245ENST00000602550 APBB1O00213 710 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 ASGR1P07306 291 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 C6orf222P0C671 652 aaPredicted RBP17.12■□□□□ 0.33
HCG18-245ENST00000602550 ACRP10323 421 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 CDK8P49336 464 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 ADGRE1Q14246 886 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 ZNF467Q7Z7K2 595 aaPredicted RBP17.12■□□□□ 0.33
HCG18-245ENST00000602550 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 TEX13BQ9BXU2 312 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 ABHD16BQ9H3Z7 469 aa17.12■□□□□ 0.33
HCG18-245ENST00000602550 RAD21O60216 631 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
HCG18-245ENST00000602550 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
HCG18-245ENST00000602550 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
HCG18-245ENST00000602550 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
HCG18-245ENST00000602550 DNAJC25-GNG10A0A024R161 153 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 TCRBV5S4A2TA0A5A2 114 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 FGBP02675 491 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 GJA9P57773 515 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 AAK1Q2M2I8 961 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 HSP90AB4PQ58FF6 505 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
HCG18-245ENST00000602550 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
HCG18-245ENST00000602550 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 UPF3AQ9H1J1 476 aaKnown RBP17.1■□□□□ 0.33
HCG18-245ENST00000602550 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
HCG18-245ENST00000602550 CXXC1Q9P0U4 656 aaPredicted RBP17.1■□□□□ 0.33
HCG18-245ENST00000602550 MCM3APO60318 1980 aa17.09■□□□□ 0.33
HCG18-245ENST00000602550 GOLIM4O00461 696 aa17.09■□□□□ 0.33
HCG18-245ENST00000602550 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
HCG18-245ENST00000602550 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
HCG18-245ENST00000602550 NKX2-4Q9H2Z4 354 aa17.09■□□□□ 0.33
HCG18-245ENST00000602550 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
HCG18-245ENST00000602550 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
HCG18-245ENST00000602550 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 USP17L21D6R901 530 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 PRKAB2O43741 272 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 CD4P01730 458 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
HCG18-245ENST00000602550 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
HCG18-245ENST00000602550 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.32
HCG18-245ENST00000602550 GBF1Q92538 1859 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 ZBED4O75132 1171 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 CABYRO75952 493 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 MBD4O95243 580 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 CYP2C18P33260 490 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
HCG18-245ENST00000602550 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 ANKRD35Q8N283 1001 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
HCG18-245ENST00000602550 RHPN1Q8TCX5 695 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 FBXO40Q9UH90 709 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
HCG18-245ENST00000602550 BMP1P13497 986 aa17.06■□□□□ 0.32
HCG18-245ENST00000602550 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
HCG18-245ENST00000602550 NKX3-2P78367 333 aa17.06■□□□□ 0.32
HCG18-245ENST00000602550 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
HCG18-245ENST00000602550 RPUSD2Q8IZ73 545 aaKnown RBP17.06■□□□□ 0.32
HCG18-245ENST00000602550 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms