RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 LRP2BPQ9P2M1 347 aa17.64■□□□□ 0.41
TRIM11-205ENST00000602308 CDK5RAP2Q96SN8 1893 aa17.64■□□□□ 0.41
TRIM11-205ENST00000602308 CTAGE5O15320 804 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 SLC25A27O95847 323 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 KCNA5P22460 613 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 GJA9P57773 515 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 GNASQ5JWF2 1037 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 PTCRAQ6ISU1 281 aaPredicted RBP17.63■□□□□ 0.41
TRIM11-205ENST00000602308 MFSD14AQ96MC6 490 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 AGBL1Q96MI9 1066 aa17.63■□□□□ 0.41
TRIM11-205ENST00000602308 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
TRIM11-205ENST00000602308 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
TRIM11-205ENST00000602308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.63■□□□□ 0.41
TRIM11-205ENST00000602308 ZFHX2Q9C0A1 2572 aaPredicted RBP17.63■□□□□ 0.41
TRIM11-205ENST00000602308 GRXCR2A6NFK2 248 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 GFRA3O60609 400 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 KCTD2Q14681 263 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 IER5LQ5T953 404 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 NAA16Q6N069 864 aaPredicted RBP17.62■□□□□ 0.41
TRIM11-205ENST00000602308 TRPV6Q9H1D0 765 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 LMCD1Q9NZU5 365 aa17.62■□□□□ 0.41
TRIM11-205ENST00000602308 FLOT1O75955 427 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 PTPN5P54829 565 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 SEPT2Q15019 361 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 GDPD5Q8WTR4 605 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
TRIM11-205ENST00000602308 DCHS1Q96JQ0 3298 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 B4GALT4O60513 344 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 SHMT1P34896 483 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 MCAMP43121 646 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
TRIM11-205ENST00000602308 RIOX2Q8IUF8 465 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
TRIM11-205ENST00000602308 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 EHD4Q9H223 541 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 SPC25Q9HBM1 224 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 ZNF536O15090 1300 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
TRIM11-205ENST00000602308 PTPRZ1P23471 2315 aaPredicted RBP17.59■□□□□ 0.41
TRIM11-205ENST00000602308 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
TRIM11-205ENST00000602308 ARID4AP29374 1257 aaPredicted RBP17.59■□□□□ 0.41
TRIM11-205ENST00000602308 BEX3Q00994 111 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 TFCP2Q12800 502 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 TCF15Q12870 199 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 CXCL17Q6UXB2 119 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 MAMDC4Q6UXC1 1216 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 HERC6Q8IVU3 1022 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 PHOSPHO2Q8TCD6 241 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 NEUROD6Q96NK8 337 aa17.59■□□□□ 0.41
TRIM11-205ENST00000602308 PFKMP08237 780 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
TRIM11-205ENST00000602308 ITGA7Q13683 1181 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 ACVR2BQ13705 512 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 DEFB128Q7Z7B8 93 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 AKAP2Q9Y2D5 859 aa17.58■□□□□ 0.4
TRIM11-205ENST00000602308 NKX3-2P78367 333 aa17.57■□□□□ 0.4
TRIM11-205ENST00000602308 ZP2Q05996 745 aa17.57■□□□□ 0.4
TRIM11-205ENST00000602308 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
TRIM11-205ENST00000602308 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
TRIM11-205ENST00000602308 MYO15AQ9UKN7 3530 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 TECTAO75443 2155 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 LCHNA4D1U4 455 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 STAT3P40763 770 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
TRIM11-205ENST00000602308 NEK9Q8TD19 979 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 FAM86C1Q9NVL1 165 aa17.56■□□□□ 0.4
TRIM11-205ENST00000602308 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
TRIM11-205ENST00000602308 PLCD1P51178 756 aa17.55■□□□□ 0.4
TRIM11-205ENST00000602308 PUS10Q3MIT2 529 aaKnown RBP17.55■□□□□ 0.4
TRIM11-205ENST00000602308 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
TRIM11-205ENST00000602308 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.55■□□□□ 0.4
TRIM11-205ENST00000602308 ASTN1O14525 1302 aa17.54■□□□□ 0.4
TRIM11-205ENST00000602308 H3BQ06 376 aaPredicted RBP17.54■□□□□ 0.4
TRIM11-205ENST00000602308 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
TRIM11-205ENST00000602308 ERMP1Q7Z2K6 904 aa17.54■□□□□ 0.4
TRIM11-205ENST00000602308 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
TRIM11-205ENST00000602308 ZNF214Q9UL59 606 aaPredicted RBP17.54■□□□□ 0.4
TRIM11-205ENST00000602308 MYH1P12882 1939 aa17.54■□□□□ 0.4
TRIM11-205ENST00000602308 CACNA1HO95180 2353 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 CABYRO75952 493 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 ACTN1P12814 892 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 IRS1P35568 1242 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 USP5P45974 858 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 PSMC6P62333 389 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 TTC6Q86TZ1 520 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 SIAH1Q8IUQ4 282 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 ABHD16BQ9H3Z7 469 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 ALG13Q9NP73 1137 aaKnown RBP17.53■□□□□ 0.4
TRIM11-205ENST00000602308 MUTYHQ9UIF7 546 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms