RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
SMG9-213ENST00000602222 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
SMG9-213ENST00000602222 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
SMG9-213ENST00000602222 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
SMG9-213ENST00000602222 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
SMG9-213ENST00000602222 FOXP2O15409 715 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 ZNF865P0CJ78 1059 aaPredicted RBP18.02■□□□□ 0.48
SMG9-213ENST00000602222 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 FDX1P10109 184 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 RARBP10826 455 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 OAZ1P54368 228 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 MDM2Q00987 491 aaPredicted RBP18.02■□□□□ 0.48
SMG9-213ENST00000602222 HDAC1Q13547 482 aaPredicted RBP18.02■□□□□ 0.48
SMG9-213ENST00000602222 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 ANKRD45Q5TZF3 282 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 MAMDC4Q6UXC1 1216 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 TICAM2Q86XR7 235 aa18.02■□□□□ 0.48
SMG9-213ENST00000602222 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 SYNGAP1Q96PV0 1343 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 TAL1P17542 331 aaPredicted RBP18.01■□□□□ 0.47
SMG9-213ENST00000602222 TFAP4Q01664 338 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
SMG9-213ENST00000602222 EVI5LQ96CN4 794 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 LBHD1Q9BQE6 289 aaPredicted RBP18.01■□□□□ 0.47
SMG9-213ENST00000602222 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
SMG9-213ENST00000602222 PHF24Q9UPV7 400 aa18.01■□□□□ 0.47
SMG9-213ENST00000602222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMG9-213ENST00000602222 BMP3P12645 472 aa18■□□□□ 0.47
SMG9-213ENST00000602222 AKR1A1P14550 325 aa18■□□□□ 0.47
SMG9-213ENST00000602222 ADCYAP1R1P41586 468 aa18■□□□□ 0.47
SMG9-213ENST00000602222 CPXCR1Q8N123 301 aa18■□□□□ 0.47
SMG9-213ENST00000602222 LRRC47Q8N1G4 583 aaKnown RBP18■□□□□ 0.47
SMG9-213ENST00000602222 CHST13Q8NET6 341 aa18■□□□□ 0.47
SMG9-213ENST00000602222 KIFC2Q96AC6 838 aa18■□□□□ 0.47
SMG9-213ENST00000602222 DDX11Q96FC9 970 aa18■□□□□ 0.47
SMG9-213ENST00000602222 GMCL1Q96IK5 515 aa18■□□□□ 0.47
SMG9-213ENST00000602222 PRKAG2Q9UGJ0 569 aa18■□□□□ 0.47
SMG9-213ENST00000602222 FBXO40Q9UH90 709 aa18■□□□□ 0.47
SMG9-213ENST00000602222 ANAPC4Q9UJX5 808 aa18■□□□□ 0.47
SMG9-213ENST00000602222 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
SMG9-213ENST00000602222 ATP11BQ9Y2G3 1177 aa18■□□□□ 0.47
SMG9-213ENST00000602222 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
SMG9-213ENST00000602222 PLA2G6O60733 806 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 SNAI1O95863 264 aaPredicted RBP17.99■□□□□ 0.47
SMG9-213ENST00000602222 PDE1AP54750 535 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 AAMPQ13685 434 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 ALX1Q15699 326 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 RNF180Q86T96 592 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 RAVER2Q9HCJ3 691 aaKnown RBP17.99■□□□□ 0.47
SMG9-213ENST00000602222 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
SMG9-213ENST00000602222 FGRP09769 529 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 NOVP48745 357 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 TRIM60Q495X7 471 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 FAM160B2Q86V87 743 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 CHURC1Q8WUH1 139 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 FERMT2Q96AC1 680 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
SMG9-213ENST00000602222 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
SMG9-213ENST00000602222 TMEM232C9JQI7 657 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 ADAMTS4O75173 837 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 PGK1P00558 417 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
SMG9-213ENST00000602222 STAT2P52630 851 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 FAM184BQ9ULE4 1060 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 PLXNA1Q9UIW2 1896 aa17.97■□□□□ 0.47
SMG9-213ENST00000602222 ORC4O43929 436 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 SLC1A4P43007 532 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 CTDSPL2Q05D32 466 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 FGD4Q96M96 766 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 PDLIM7Q9NR12 457 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 TACC3Q9Y6A5 838 aa17.96■□□□□ 0.47
SMG9-213ENST00000602222 TSPY2A6NKD2 308 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
SMG9-213ENST00000602222 MCCP23508 829 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 TLE2Q04725 743 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 TKFCQ3LXA3 575 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 FAM109BQ6ICB4 259 aaPredicted RBP17.95■□□□□ 0.46
SMG9-213ENST00000602222 CCSAPQ6IQ19 270 aaPredicted RBP17.95■□□□□ 0.46
SMG9-213ENST00000602222 RCSD1Q6JBY9 416 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 ABHD16BQ9H3Z7 469 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.95■□□□□ 0.46
SMG9-213ENST00000602222 STX8Q9UNK0 236 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 ZNF536O15090 1300 aa17.95■□□□□ 0.46
SMG9-213ENST00000602222 A0A1W2PQ45 241 aaPredicted RBP17.94■□□□□ 0.46
SMG9-213ENST00000602222 A0A1W2PQY0 241 aa17.94■□□□□ 0.46
SMG9-213ENST00000602222 TRIM43BA6NCK2 446 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms