RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	CREB3L3	Q68CJ9	461 aa		31.52	■■■□□ 2.64
USF2-215	ENST00000602164	MB21D2	Q8IYB1	491 aa	Predicted RBP	31.52	■■■□□ 2.64
USF2-215	ENST00000602164	SLC15A5	A6NIM6	579 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	STAT3	P40763	770 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	WDR78	Q5VTH9	848 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	NCOA7	Q8NI08	942 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	CHURC1	Q8WUH1	139 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	UBAC1	Q9BSL1	405 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	MROH8	Q9H579	483 aa		31.51	■■■□□ 2.63
USF2-215	ENST00000602164	XRCC5	P13010	732 aa	Known RBP	31.5	■■■□□ 2.63
USF2-215	ENST00000602164	SOX10	P56693	466 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	ANTXR2	P58335	489 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	CCDC96	Q2M329	555 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	BTNL9	Q6UXG8	535 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	RALYL	Q86SE5	291 aa	Known RBP	31.5	■■■□□ 2.63
USF2-215	ENST00000602164	PNMA1	Q8ND90	353 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	TEX13B	Q9BXU2	312 aa		31.5	■■■□□ 2.63
USF2-215	ENST00000602164	ISY1	Q9ULR0	285 aa	Known RBP	31.5	■■■□□ 2.63
USF2-215	ENST00000602164	SLC25A27	O95847	323 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	CYP2B6	P20813	491 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	ZNF543	Q08ER8	600 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	MAP2K5	Q13163	448 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	COL9A3	Q14050	684 aa	Predicted RBP	31.49	■■■□□ 2.63
USF2-215	ENST00000602164	TTBK2	Q6IQ55	1244 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	NCAPG2	Q86XI2	1143 aa		31.49	■■■□□ 2.63
USF2-215	ENST00000602164	CWC22	Q9HCG8	908 aa	Known RBP	31.49	■■■□□ 2.63
USF2-215	ENST00000602164	ZBED4	O75132	1171 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	RGS2	P41220	211 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	TRIB2	Q92519	343 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	APBA2	Q99767	749 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	KAT14	Q9H8E8	782 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	PRR12	Q9ULL5	1215 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	IVNS1ABP	Q9Y6Y0	642 aa		31.48	■■■□□ 2.63
USF2-215	ENST00000602164	FRMPD2	Q68DX3	1309 aa	Predicted RBP	31.48	■■■□□ 2.63
USF2-215	ENST00000602164	HOXC6	P09630	235 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	FDX1	P10109	184 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	OAZ1	P54368	228 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	MTFR1	Q15390	333 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	SNRNP48	Q6IEG0	339 aa	Known RBP	31.47	■■■□□ 2.63
USF2-215	ENST00000602164	RAVER2	Q9HCJ3	691 aa	Known RBP	31.47	■■■□□ 2.63
USF2-215	ENST00000602164	RIPK3	Q9Y572	518 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	ZNF536	O15090	1300 aa		31.47	■■■□□ 2.63
USF2-215	ENST00000602164	STRN	O43815	780 aa		31.46	■■■□□ 2.63
USF2-215	ENST00000602164	INHA	P05111	366 aa		31.46	■■■□□ 2.63
USF2-215	ENST00000602164	IK	Q13123	557 aa	Predicted RBP	31.46	■■■□□ 2.63
USF2-215	ENST00000602164	ABRA	Q8N0Z2	381 aa		31.46	■■■□□ 2.63
USF2-215	ENST00000602164	GPCPD1	Q9NPB8	672 aa		31.46	■■■□□ 2.63
USF2-215	ENST00000602164	HMGCR	P04035	888 aa		31.45	■■■□□ 2.63
USF2-215	ENST00000602164	ADORA2A	P29274	412 aa		31.45	■■■□□ 2.63
USF2-215	ENST00000602164	COPB2	P35606	906 aa		31.45	■■■□□ 2.63
USF2-215	ENST00000602164	SLC16A2	P36021	539 aa		31.45	■■■□□ 2.63
USF2-215	ENST00000602164	IFIT1B	Q5T764	474 aa	Known RBP	31.45	■■■□□ 2.63
USF2-215	ENST00000602164	CPXCR1	Q8N123	301 aa		31.45	■■■□□ 2.63
USF2-215	ENST00000602164	POTEF	A5A3E0	1075 aa		31.44	■■■□□ 2.62
USF2-215	ENST00000602164	CCL14	Q16627	93 aa		31.44	■■■□□ 2.62
USF2-215	ENST00000602164	CHST3	Q7LGC8	479 aa		31.44	■■■□□ 2.62
USF2-215	ENST00000602164	SENP2	Q9HC62	589 aa		31.44	■■■□□ 2.62
USF2-215	ENST00000602164	BIN2	Q9UBW5	565 aa	Predicted RBP	31.44	■■■□□ 2.62
USF2-215	ENST00000602164	MYC	P01106	439 aa	Predicted RBP	31.43	■■■□□ 2.62
USF2-215	ENST00000602164	IGHA2	P01877	340 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	RGS19	P49795	217 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	UBXN2A	P68543	259 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	TRIM32	Q13049	653 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	SYDE2	Q5VT97	1194 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	31.43	■■■□□ 2.62	3e-6	■■■■■ 31.5
USF2-215	ENST00000602164	NPLOC4	Q8TAT6	608 aa		31.43	■■■□□ 2.62
USF2-215	ENST00000602164	RANBP17	Q9H2T7	1088 aa	Known RBP	31.43	■■■□□ 2.62
USF2-215	ENST00000602164	IFIT3	O14879	490 aa	Known RBP	31.42	■■■□□ 2.62
USF2-215	ENST00000602164	COBL	O75128	1261 aa		31.42	■■■□□ 2.62
USF2-215	ENST00000602164	SNAP25	P60880	206 aa		31.42	■■■□□ 2.62
USF2-215	ENST00000602164	GPATCH4	Q5T3I0	446 aa	Known RBP	31.42	■■■□□ 2.62
USF2-215	ENST00000602164	RASEF	Q8IZ41	740 aa		31.42	■■■□□ 2.62
USF2-215	ENST00000602164	IGDCC4	Q8TDY8	1250 aa		31.42	■■■□□ 2.62
USF2-215	ENST00000602164	FLRT1	Q9NZU1	646 aa		31.42	■■■□□ 2.62
USF2-215	ENST00000602164	CTDP1	Q9Y5B0	961 aa	Predicted RBP	31.42	■■■□□ 2.62
USF2-215	ENST00000602164	KIAA0100	Q14667	2235 aa	Known RBP	31.41	■■■□□ 2.62
USF2-215	ENST00000602164	GOLGA8H	P0CJ92	632 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	FCER1A	P12319	257 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	CCL5	P13501	91 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	ZKSCAN1	P17029	563 aa	Predicted RBP	31.41	■■■□□ 2.62
USF2-215	ENST00000602164	TSGA10IP	Q3SY00	556 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	MAP3K21	Q5TCX8	1036 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	RNF20	Q5VTR2	975 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	TRMT44	Q8IYL2	757 aa	Known RBP	31.41	■■■□□ 2.62
USF2-215	ENST00000602164	UNC93B1	Q9H1C4	597 aa		31.41	■■■□□ 2.62
USF2-215	ENST00000602164	BRCA2	P51587	3418 aa		31.4	■■■□□ 2.62
USF2-215	ENST00000602164	KCNB2	Q92953	911 aa		31.4	■■■□□ 2.62
USF2-215	ENST00000602164	AGBL1	Q96MI9	1066 aa		31.4	■■■□□ 2.62
USF2-215	ENST00000602164	MMP19	Q99542	508 aa		31.4	■■■□□ 2.62
USF2-215	ENST00000602164	MTA3	Q9BTC8	594 aa		31.4	■■■□□ 2.62
USF2-215	ENST00000602164	ZNFX1	Q9P2E3	1918 aa	Known RBP	31.39	■■■□□ 2.62
USF2-215	ENST00000602164	PRC1	O43663	620 aa		31.39	■■■□□ 2.62
USF2-215	ENST00000602164	ASPRV1	Q53RT3	343 aa		31.39	■■■□□ 2.62
USF2-215	ENST00000602164	GPHN	Q9NQX3	736 aa	Predicted RBP	31.39	■■■□□ 2.62
USF2-215	ENST00000602164	WTAP	Q15007	396 aa		31.38	■■■□□ 2.61
USF2-215	ENST00000602164	SART3	Q15020	963 aa	Known RBP	31.38	■■■□□ 2.61
USF2-215	ENST00000602164	TMEM67	Q5HYA8	995 aa		31.38	■■■□□ 2.61
USF2-215	ENST00000602164	CCDC174	Q6PII3	467 aa		31.38	■■■□□ 2.61
USF2-215	ENST00000602164	TMEM106C	Q9BVX2	250 aa		31.38	■■■□□ 2.61
USF2-215	ENST00000602164	CPVL	Q9H3G5	476 aa		31.38	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms