RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 FGAP02671 866 aa26.88■■□□□ 1.89
SSBP4-209ENST00000601357 CHRDL2Q6WN34 429 aa26.88■■□□□ 1.89
SSBP4-209ENST00000601357 IL17RBQ9NRM6 502 aa26.88■■□□□ 1.89
SSBP4-209ENST00000601357 FEM1BQ9UK73 627 aa26.88■■□□□ 1.89
SSBP4-209ENST00000601357 HSPD1P10809 573 aaKnown RBP26.87■■□□□ 1.89
SSBP4-209ENST00000601357 NOVP48745 357 aa26.87■■□□□ 1.89
SSBP4-209ENST00000601357 SLFN13Q68D06 897 aa26.87■■□□□ 1.89
SSBP4-209ENST00000601357 RILPL2Q969X0 211 aa26.87■■□□□ 1.89
SSBP4-209ENST00000601357 GMCL1Q96IK5 515 aa26.87■■□□□ 1.89
SSBP4-209ENST00000601357 SLC38A10Q9HBR0 1119 aa26.87■■□□□ 1.89
SSBP4-209ENST00000601357 TSPY2A6NKD2 308 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 SDSP20132 328 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 CNGA1P29973 690 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 KCTD2Q14681 263 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 ZNF792Q3KQV3 632 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 PPP4R3BQ5MIZ7 849 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 DIS3Q9Y2L1 958 aaKnown RBP26.86■■□□□ 1.89
SSBP4-209ENST00000601357 RIPK3Q9Y572 518 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 CCDC171Q6TFL3 1326 aa26.86■■□□□ 1.89
SSBP4-209ENST00000601357 NMT2O60551 498 aa26.85■■□□□ 1.89
SSBP4-209ENST00000601357 PGK2P07205 417 aa26.85■■□□□ 1.89
SSBP4-209ENST00000601357 BMP3P12645 472 aa26.85■■□□□ 1.89
SSBP4-209ENST00000601357 SNRNP48Q6IEG0 339 aaKnown RBP26.85■■□□□ 1.89
SSBP4-209ENST00000601357 KIFC2Q96AC6 838 aa26.85■■□□□ 1.89
SSBP4-209ENST00000601357 RBM27Q9P2N5 1060 aaKnown RBP26.85■■□□□ 1.89
SSBP4-209ENST00000601357 SEPT4O43236 478 aa26.84■■□□□ 1.89
SSBP4-209ENST00000601357 FXR1P51114 621 aaKnown RBP eCLIP26.84■■□□□ 1.89
SSBP4-209ENST00000601357 RANBP6O60518 1105 aaKnown RBP26.83■■□□□ 1.89
SSBP4-209ENST00000601357 ZBED4O75132 1171 aa26.83■■□□□ 1.89
SSBP4-209ENST00000601357 OAZ1P54368 228 aa26.83■■□□□ 1.89
SSBP4-209ENST00000601357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.83■■□□□ 1.898e-7■■■■□ 26.7
SSBP4-209ENST00000601357 C7orf61Q8IZ16 206 aa26.83■■□□□ 1.89
SSBP4-209ENST00000601357 STX8Q9UNK0 236 aa26.83■■□□□ 1.89
SSBP4-209ENST00000601357 PRAMEF19Q5SWL8 479 aa26.82■■□□□ 1.88
SSBP4-209ENST00000601357 NRBP1Q9UHY1 535 aa26.82■■□□□ 1.88
SSBP4-209ENST00000601357 LAMA4Q16363 1823 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 DNAJC25-GNG10A0A024R161 153 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 TMEM232C9JQI7 657 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 DNM1LO00429 736 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 STAT2P52630 851 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 CPXCR1Q8N123 301 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 TINF2Q9BSI4 451 aa26.81■■□□□ 1.88
SSBP4-209ENST00000601357 RAVER2Q9HCJ3 691 aaKnown RBP26.81■■□□□ 1.88
SSBP4-209ENST00000601357 PLA2G6O60733 806 aa26.8■■□□□ 1.88
SSBP4-209ENST00000601357 FDX1P10109 184 aa26.8■■□□□ 1.88
SSBP4-209ENST00000601357 MCCP23508 829 aa26.8■■□□□ 1.88
SSBP4-209ENST00000601357 SLC1A4P43007 532 aa26.8■■□□□ 1.88
SSBP4-209ENST00000601357 MFAP1P55081 439 aaKnown RBP26.8■■□□□ 1.88
SSBP4-209ENST00000601357 FAM160B2Q86V87 743 aa26.8■■□□□ 1.88
SSBP4-209ENST00000601357 LRRC26Q2I0M4 334 aa26.79■■□□□ 1.88
SSBP4-209ENST00000601357 CHURC1Q8WUH1 139 aa26.79■■□□□ 1.88
SSBP4-209ENST00000601357 STAG1Q8WVM7 1258 aa26.79■■□□□ 1.88
SSBP4-209ENST00000601357 TCP11L1Q9NUJ3 509 aa26.79■■□□□ 1.88
SSBP4-209ENST00000601357 CTDP1Q9Y5B0 961 aaPredicted RBP26.79■■□□□ 1.88
SSBP4-209ENST00000601357 TRIOBPQ9H2D6 2365 aa26.79■■□□□ 1.88
SSBP4-209ENST00000601357 PCP11498 1178 aaKnown RBP26.78■■□□□ 1.88
SSBP4-209ENST00000601357 RCSD1Q6JBY9 416 aa26.78■■□□□ 1.88
SSBP4-209ENST00000601357 RASGRP2Q7LDG7 609 aa26.78■■□□□ 1.88
SSBP4-209ENST00000601357 MSL3Q8N5Y2 521 aaKnown RBP26.78■■□□□ 1.88
SSBP4-209ENST00000601357 ZNF536O15090 1300 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 HAND2P61296 217 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 ANO1Q5XXA6 986 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 TBC1D10CQ8IV04 446 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 ARRDC4Q8NCT1 418 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 CHST13Q8NET6 341 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 SENP6Q9GZR1 1112 aaPredicted RBP26.77■■□□□ 1.88
SSBP4-209ENST00000601357 FBXO40Q9UH90 709 aa26.77■■□□□ 1.88
SSBP4-209ENST00000601357 SZT2Q5T011 3432 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 HIP1O00291 1037 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 TAL1P17542 331 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 PDE4AP27815 886 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 RRP12Q5JTH9 1297 aaKnown RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 AKNAD1Q5T1N1 836 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 GJC2Q5T442 439 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 CWC27Q6UX04 472 aaKnown RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 MAMDC4Q6UXC1 1216 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 KCTD1Q719H9 257 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 ZNF467Q7Z7K2 595 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 DDX11Q96FC9 970 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 GDF15Q99988 308 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 TOMM22Q9NS69 142 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 DIAPH3Q9NSV4 1193 aa26.76■■□□□ 1.87
SSBP4-209ENST00000601357 ZMYND8Q9ULU4 1186 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-209ENST00000601357 LAMA3Q16787 3333 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 SMCHD1A6NHR9 2005 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 SYNGAP1Q96PV0 1343 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 A0A1W2PPC1 479 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 ZNF865P0CJ78 1059 aaPredicted RBP26.75■■□□□ 1.87
SSBP4-209ENST00000601357 SLC4A3P48751 1232 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 CHMP4CQ96CF2 233 aa26.75■■□□□ 1.87
SSBP4-209ENST00000601357 ISY1Q9ULR0 285 aaKnown RBP26.75■■□□□ 1.87
SSBP4-209ENST00000601357 SYN1P17600 705 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 MFSD6Q6ZSS7 791 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 DCAF4Q8WV16 495 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 FGD4Q96M96 766 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 TMEM47Q9BQJ4 181 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 PRR12Q9ULL5 1215 aa26.74■■□□□ 1.87
SSBP4-209ENST00000601357 TOP1P11387 765 aaKnown RBP26.73■■□□□ 1.87
SSBP4-209ENST00000601357 BMP8BP34820 402 aa26.73■■□□□ 1.87
SSBP4-209ENST00000601357 IKQ13123 557 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms