RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 M0R2N6 131 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 PRCPP42785 496 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 GRM4Q14833 912 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
SMG9-211ENST00000601170 ANKRD20A12PQ8NF67 263 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 GOLGA1Q92805 767 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 MAD2L2Q9UI95 211 aa16.32■□□□□ 0.2
SMG9-211ENST00000601170 USP17L3A6NCW0 530 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 USP17L4A6NCW7 530 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 ERVK-24P63145 666 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 USP17L1Q7RTZ2 530 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 ACRBPQ8NEB7 543 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
SMG9-211ENST00000601170 RABGGTAQ92696 567 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
SMG9-211ENST00000601170 ZPR1O75312 459 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 TM4SF1P30408 202 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 ZNF569Q5MCW4 686 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 CC2D1AQ6P1N0 951 aaPredicted RBP16.31■□□□□ 0.2
SMG9-211ENST00000601170 DTHD1Q6ZMT9 781 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 ANKS1AQ92625 1134 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
SMG9-211ENST00000601170 PCDHA6Q9UN73 950 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 PCDHA8Q9Y5H6 950 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
SMG9-211ENST00000601170 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
SMG9-211ENST00000601170 GNPATO15228 680 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 LDHBP07195 334 aaKnown RBP16.3■□□□□ 0.2
SMG9-211ENST00000601170 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TTF2Q9UNY4 1162 aaKnown RBP16.3■□□□□ 0.2
SMG9-211ENST00000601170 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 CYTH3O43739 400 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 GNAQP50148 359 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 TRIM14Q14142 442 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 INF2Q27J81 1249 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 HEATR3Q7Z4Q2 680 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 SLC51AQ86UW1 340 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
SMG9-211ENST00000601170 NT5C2P49902 561 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 DIXDC1Q155Q3 683 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 MYH1P12882 1939 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 H7C1D1 291 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 ATP8B1O43520 1251 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 SASH3O75995 380 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 UBXN1Q04323 297 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 CYP26C1Q6V0L0 522 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 DAGLBQ8NCG7 672 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 SLC44A5Q8NCS7 719 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 WDR66Q8TBY9 1149 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
SMG9-211ENST00000601170 ABL1P00519 1130 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 PARP1P09874 1014 aaKnown RBP16.28■□□□□ 0.2
SMG9-211ENST00000601170 KRT9P35527 623 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 GRIK5Q16478 980 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
SMG9-211ENST00000601170 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
SMG9-211ENST00000601170 SLC35F6Q8N357 371 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 PLIN2Q99541 437 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 PUF60Q9UHX1 559 aaKnown RBP16.28■□□□□ 0.2
SMG9-211ENST00000601170 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 STXBP3O00186 592 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 ZBTB22O15209 634 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 UBA7P41226 1012 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
SMG9-211ENST00000601170 KIF4BQ2VIQ3 1234 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 CCDC178Q5BJE1 867 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 ARFGAP3Q9NP61 516 aa16.28■□□□□ 0.2
SMG9-211ENST00000601170 KLRC4O43908 158 aa16.27■□□□□ 0.2
SMG9-211ENST00000601170 BAG3O95817 575 aa16.27■□□□□ 0.2
SMG9-211ENST00000601170 KCNB1Q14721 858 aa16.27■□□□□ 0.2
SMG9-211ENST00000601170 GALNT17Q6IS24 598 aa16.27■□□□□ 0.2
SMG9-211ENST00000601170 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.2
SMG9-211ENST00000601170 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms