RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 CLIP2Q9UDT6 1046 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 DIS3Q9Y2L1 958 aaKnown RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 RIPK3Q9Y572 518 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 CTDP1Q9Y5B0 961 aaPredicted RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 ROBO3Q96MS0 1386 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 DNAH12Q6ZR08 3092 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 BAZ2AQ9UIF9 1905 aaKnown RBP9.96□□□□□ -0.81
CCDC9-206ENST00000601154 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 COPB2P35606 906 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 TDO2P48775 406 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 ACLYP53396 1101 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 FPGSQ05932 587 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 C20orf194Q5TEA3 1177 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.82
CCDC9-206ENST00000601154 OSBP2Q969R2 916 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 EPB41L4AQ9HCS5 686 aaPredicted RBP9.96□□□□□ -0.82
CCDC9-206ENST00000601154 HOMER2Q9NSB8 354 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 ECHDC1Q9NTX5 307 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 FAM184BQ9ULE4 1060 aa9.96□□□□□ -0.82
CCDC9-206ENST00000601154 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 DCDC2CA8MYV0 355 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 KIAA0355O15063 1070 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 GPAA1O43292 621 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 ZBED4O75132 1171 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 SNAI1O95863 264 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 APPP05067 770 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 C6orf222P0C671 652 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 FAAP100Q0VG06 881 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 KCNA10Q16322 511 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 SBK1Q52WX2 424 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 ANKRD35Q8N283 1001 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 KBTBD3Q8NAB2 608 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 PRPF38AQ8NAV1 312 aaKnown RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 VTI1AQ96AJ9 217 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 CHMP4BQ9H444 224 aaKnown RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-206ENST00000601154 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 RCAN3Q9UKA8 241 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 MYH8P13535 1937 aa9.95□□□□□ -0.82
CCDC9-206ENST00000601154 COL11A1P12107 1806 aaPredicted RBP9.94□□□□□ -0.82
CCDC9-206ENST00000601154 PARP14Q460N5 1801 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 SYNGAP1Q96PV0 1343 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 M0R2C6 588 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 ADCY6O43306 1168 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 ACVR2BQ13705 512 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 ZNF444Q8N0Y2 327 aaPredicted RBP9.94□□□□□ -0.82
CCDC9-206ENST00000601154 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 APPBP2Q92624 585 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 GLT1D1Q96MS3 346 aa9.94□□□□□ -0.82
CCDC9-206ENST00000601154 TSEN34Q9BSV6 310 aaKnown RBP9.94□□□□□ -0.82
CCDC9-206ENST00000601154 LAMA2P24043 3122 aaKnown RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 DNAJC25-GNG10A0A024R161 153 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 IGKV6D-41A0A0C4DH26 115 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 RNF113AO15541 343 aaKnown RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 DUSP11O75319 330 aaKnown RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 ASGR1P07306 291 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 DNAJB2P25686 324 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 IKQ13123 557 aaPredicted RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 GRIN2CQ14957 1233 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 CCDC144BQ3MJ40 725 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 MAMDC4Q6UXC1 1216 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 ARMCX2Q7L311 632 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 ANKRD33Q7Z3H0 272 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 MSL3Q8N5Y2 521 aaKnown RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 KLHDC9Q8NEP7 349 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 FGD4Q96M96 766 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC9-206ENST00000601154 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 SPC25Q9HBM1 224 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 SLC38A10Q9HBR0 1119 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 TBX21Q9UL17 535 aa9.93□□□□□ -0.82
CCDC9-206ENST00000601154 GRXCR1A8MXD5 290 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 TMEM232C9JQI7 657 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 ATP2A1O14983 1001 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 TTLL1O95922 423 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 TIMP1P01033 207 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 TSPY3P0CV98 308 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 TSPY8P0CW00 308 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 ACRP10323 421 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 BMP3P12645 472 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 PTGS1P23219 599 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 BEX3Q00994 111 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 CNTN2Q02246 1040 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 SLFN13Q68D06 897 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 CCSAPQ6IQ19 270 aaPredicted RBP9.92□□□□□ -0.82
CCDC9-206ENST00000601154 GIMAP6Q6P9H5 292 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
CCDC9-206ENST00000601154 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms