RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MBD4O95243 580 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ERCC3P19447 782 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DSG3P32926 999 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ADD2P35612 726 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CCNA1P78396 465 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CCAR1Q8IX12 1150 aaKnown RBP12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SPICE1Q8N0Z3 855 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PRSS33Q8NF86 280 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 LPAR1Q92633 364 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 FBXO28Q9NVF7 368 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SPTBN2O15020 2390 aa12.21□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CNGA1P29973 690 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 EPHB4P54760 987 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 COG2Q14746 738 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TMEM132BQ14DG7 1078 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TANGO6Q9C0B7 1094 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 BOLA2Q9H3K6 86 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TMX2Q9Y320 296 aa12.2□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 LCTP09848 1927 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 DNM1LO00429 736 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PBX2P40425 430 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ICA1Q05084 483 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TTF1Q15361 905 aaPredicted RBP12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 C12orf60Q5U649 245 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SHCBP1Q8NEM2 672 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 REPS2Q8NFH8 660 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 LENG1Q96BZ8 264 aaPredicted RBP12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PBX4Q9BYU1 374 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 VCPKMTQ9H867 229 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PAG1Q9NWQ8 432 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ATP11BQ9Y2G3 1177 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 IVNS1ABPQ9Y6Y0 642 aa12.19□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 MED19A0JLT2 244 aaPredicted RBP12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ALADP13716 330 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ID4P47928 161 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CDK8P49336 464 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PTPN5P54829 565 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SNX17Q15036 470 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 C16orf86Q6ZW13 317 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 HERVK_113Q902F9 699 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 MAML3Q96JK9 1138 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CNTNAP3BQ96NU0 1288 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PUS7LQ9H0K6 701 aaKnown RBP12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TECTAO75443 2155 aa12.18□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TRIM43BA6NCK2 446 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 USP17L21D6R901 530 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SEPT4O43236 478 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 FLOT1O75955 427 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PGK2P07205 417 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ATP5JP18859 108 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 LRRC41Q15345 812 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 NCAPG2Q86XI2 1143 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 RPAP2Q8IXW5 612 aaPredicted RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 HAUS7Q99871 368 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 SWAP70Q9UH65 585 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ZNF214Q9UL59 606 aaPredicted RBP12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 COG5Q9UP83 839 aa12.17□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 MSCO60682 206 aa12.16□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 PLS1Q14651 629 aa12.16□□□□□ -0.46
MIA-RAB4B-201ENST00000600729 ACAP1Q15027 740 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms