RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 A0A0G2JMZ2 1700 aa18.51■□□□□ 0.55
IRF3-226ENST00000600453 PARP14Q460N5 1801 aa18.51■□□□□ 0.55
IRF3-226ENST00000600453 PLA2G6O60733 806 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 COBLO75128 1261 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 CYP2C19P33261 490 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 LHX8Q68G74 356 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 MFSD6Q6ZSS7 791 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
IRF3-226ENST00000600453 REPS2Q8NFH8 660 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 TCP11L1Q9NUJ3 509 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 FBXO40Q9UH90 709 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 DDX20Q9UHI6 824 aaKnown RBP18.5■□□□□ 0.55
IRF3-226ENST00000600453 NRBP1Q9UHY1 535 aa18.5■□□□□ 0.55
IRF3-226ENST00000600453 IGHA2P01877 340 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 STAT2P52630 851 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
IRF3-226ENST00000600453 RCSD1Q6JBY9 416 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
IRF3-226ENST00000600453 ZNF589Q86UQ0 364 aaPredicted RBP18.49■□□□□ 0.55
IRF3-226ENST00000600453 STAG1Q8WVM7 1258 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 MAML3Q96JK9 1138 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 SLC38A10Q9HBR0 1119 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 IL17RBQ9NRM6 502 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
IRF3-226ENST00000600453 ZNF236Q9UL36 1845 aa18.49■□□□□ 0.55
IRF3-226ENST00000600453 TMEM232C9JQI7 657 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 ZNF213O14771 459 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 IKQ13123 557 aaPredicted RBP18.48■□□□□ 0.55
IRF3-226ENST00000600453 RRP12Q5JTH9 1297 aaKnown RBP18.48■□□□□ 0.55
IRF3-226ENST00000600453 AKNAD1Q5T1N1 836 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 CPXCR1Q8N123 301 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 MSL3Q8N5Y2 521 aaKnown RBP18.48■□□□□ 0.55
IRF3-226ENST00000600453 ARRDC4Q8NCT1 418 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 TTC14Q96N46 770 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 CTNNA3Q9UI47 895 aa18.48■□□□□ 0.55
IRF3-226ENST00000600453 COL11A1P12107 1806 aaPredicted RBP18.48■□□□□ 0.55
IRF3-226ENST00000600453 CYBAP13498 195 aa18.47■□□□□ 0.55
IRF3-226ENST00000600453 MCCP23508 829 aa18.47■□□□□ 0.55
IRF3-226ENST00000600453 NOVP48745 357 aa18.47■□□□□ 0.55
IRF3-226ENST00000600453 CCDC178Q5BJE1 867 aa18.47■□□□□ 0.55
IRF3-226ENST00000600453 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
IRF3-226ENST00000600453 DIS3LQ8TF46 1054 aaKnown RBP18.47■□□□□ 0.55
IRF3-226ENST00000600453 SEPT4O43236 478 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 TOP1P11387 765 aaKnown RBP18.46■□□□□ 0.55
IRF3-226ENST00000600453 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
IRF3-226ENST00000600453 ZNF792Q3KQV3 632 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 DCAF4Q8WV16 495 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 ESR2Q92731 530 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
IRF3-226ENST00000600453 RAVER2Q9HCJ3 691 aaKnown RBP18.46■□□□□ 0.55
IRF3-226ENST00000600453 NMT2O60551 498 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 PGK2P07205 417 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 SLC4A3P48751 1232 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 HAND2P61296 217 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 TKFCQ3LXA3 575 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.45■□□□□ 0.54
IRF3-226ENST00000600453 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
IRF3-226ENST00000600453 SLC34A2O95436 690 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 COL6A1P12109 1028 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
IRF3-226ENST00000600453 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
IRF3-226ENST00000600453 TTC22Q5TAA0 569 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 COLQQ9Y215 455 aaPredicted RBP18.44■□□□□ 0.54
IRF3-226ENST00000600453 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 TACC3Q9Y6A5 838 aa18.44■□□□□ 0.54
IRF3-226ENST00000600453 DNM1LO00429 736 aa18.43■□□□□ 0.54
IRF3-226ENST00000600453 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
IRF3-226ENST00000600453 ZNF467Q7Z7K2 595 aaPredicted RBP18.43■□□□□ 0.54
IRF3-226ENST00000600453 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
IRF3-226ENST00000600453 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
IRF3-226ENST00000600453 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 PRAMEF19Q5SWL8 479 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 IQCA1Q86XH1 822 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 DGKHQ86XP1 1220 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 ACAD9Q9H845 621 aa18.42■□□□□ 0.54
IRF3-226ENST00000600453 DNAJC25-GNG10A0A024R161 153 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 KBTBD13C9JR72 458 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 RARBP10826 455 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 PDE4AP27815 886 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 BTNL9Q6UXG8 535 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 KRT23Q9C075 422 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 SENP6Q9GZR1 1112 aaPredicted RBP18.41■□□□□ 0.54
IRF3-226ENST00000600453 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 PRR12Q9ULL5 1215 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 SYNGAP1Q96PV0 1343 aa18.41■□□□□ 0.54
IRF3-226ENST00000600453 PLXNA1Q9UIW2 1896 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 C7orf61Q8IZ16 206 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 MTMR7Q9Y216 660 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 PFASO15067 1338 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms