RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GJA9P57773 515 aa21.5■■□□□ 1.03
SSBP4-207ENST00000600244 GABPAQ06546 454 aa21.5■■□□□ 1.03
SSBP4-207ENST00000600244 MTX1Q13505 466 aa21.5■■□□□ 1.03
SSBP4-207ENST00000600244 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
SSBP4-207ENST00000600244 SRGAP3O43295 1099 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 CA3P07451 260 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 ATP2A2P16615 1042 aaKnown RBP21.49■■□□□ 1.03
SSBP4-207ENST00000600244 TMEM67Q5HYA8 995 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 SIAH1Q8IUQ4 282 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 KCNH6Q9H252 994 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 CERS4Q9HA82 394 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 BRWD1Q9NSI6 2320 aa21.49■■□□□ 1.03
SSBP4-207ENST00000600244 MYO5AQ9Y4I1 1855 aaKnown RBP21.48■■□□□ 1.03
SSBP4-207ENST00000600244 CTAGE5O15320 804 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 CYP7A1P22680 504 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 CCL23P55773 120 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 NKX3-2P78367 333 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 GNASQ5JWF2 1037 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 CERS3Q8IU89 383 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 RPUSD2Q8IZ73 545 aaKnown RBP21.48■■□□□ 1.03
SSBP4-207ENST00000600244 FBXL18Q96ME1 805 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 MEIS3Q99687 375 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 NOC4LQ9BVI4 516 aaKnown RBP21.48■■□□□ 1.03
SSBP4-207ENST00000600244 WNT8AQ9H1J5 351 aa21.48■■□□□ 1.03
SSBP4-207ENST00000600244 PIH1D3Q9NQM4 214 aaKnown RBP21.48■■□□□ 1.03
SSBP4-207ENST00000600244 STAT3P40763 770 aa21.47■■□□□ 1.03
SSBP4-207ENST00000600244 MIGA1Q8NAN2 632 aa21.47■■□□□ 1.03
SSBP4-207ENST00000600244 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-207ENST00000600244 PARP14Q460N5 1801 aa21.47■■□□□ 1.03
SSBP4-207ENST00000600244 SPICE1Q8N0Z3 855 aa21.46■■□□□ 1.03
SSBP4-207ENST00000600244 GJD3Q8N144 294 aa21.46■■□□□ 1.03
SSBP4-207ENST00000600244 SPC25Q9HBM1 224 aa21.46■■□□□ 1.03
SSBP4-207ENST00000600244 ZNF214Q9UL59 606 aaPredicted RBP21.46■■□□□ 1.03
SSBP4-207ENST00000600244 TMX2Q9Y320 296 aa21.46■■□□□ 1.03
SSBP4-207ENST00000600244 DNAJC25-GNG10A0A024R161 153 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 ZBBXA8MT70 800 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 ARHGEF15O94989 841 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 ZAP70P43403 619 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 TAP1Q03518 808 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 ACVR2BQ13705 512 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 TTC39AQ5SRH9 613 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 FAM178BQ8IXR5 827 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 REPS2Q8NFH8 660 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-207ENST00000600244 UIMC1Q96RL1 719 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 VCPKMTQ9H867 229 aa21.45■■□□□ 1.02
SSBP4-207ENST00000600244 COL11A1P12107 1806 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-207ENST00000600244 MPHOSPH10O00566 681 aaKnown RBP21.44■■□□□ 1.02
SSBP4-207ENST00000600244 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
SSBP4-207ENST00000600244 LPXNO60711 386 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 GRB10Q13322 594 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 SAMD1Q6SPF0 538 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-207ENST00000600244 ARNTL2Q8WYA1 636 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 AGBL1Q96MI9 1066 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 FBXO28Q9NVF7 368 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 GRIN2DO15399 1336 aa21.44■■□□□ 1.02
SSBP4-207ENST00000600244 VWA5AO00534 786 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 ALADP13716 330 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 COPB2P35606 906 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 EVX2Q03828 476 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 TTLL4Q14679 1199 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 CCDC144BQ3MJ40 725 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 ALDH1L2Q3SY69 923 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 CCDC158Q5M9N0 1113 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
SSBP4-207ENST00000600244 ZNF467Q7Z7K2 595 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-207ENST00000600244 DBNDD2Q9BQY9 259 aa21.42■■□□□ 1.02
SSBP4-207ENST00000600244 TRPV6Q9H1D0 765 aa21.42■■□□□ 1.02
SSBP4-207ENST00000600244 ABHD16BQ9H3Z7 469 aa21.42■■□□□ 1.02
SSBP4-207ENST00000600244 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
SSBP4-207ENST00000600244 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-207ENST00000600244 CXCL17Q6UXB2 119 aa21.41■■□□□ 1.02
SSBP4-207ENST00000600244 SCLYQ96I15 445 aa21.41■■□□□ 1.02
SSBP4-207ENST00000600244 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
SSBP4-207ENST00000600244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.4■■□□□ 1.02
SSBP4-207ENST00000600244 B4GALT4O60513 344 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 PFKMP08237 780 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 BEX3Q00994 111 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 G3BP1Q13283 466 aaKnown RBP eCLIP21.4■■□□□ 1.02
SSBP4-207ENST00000600244 ITGA7Q13683 1181 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 CLEC10AQ8IUN9 316 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 PHOSPHO2Q8TCD6 241 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 SEZ6LQ9BYH1 1024 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 ARHGEF10LQ9HCE6 1279 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 PPP1R9AQ9ULJ8 1098 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 WDFY4Q6ZS81 3184 aa21.4■■□□□ 1.02
SSBP4-207ENST00000600244 ASTN1O14525 1302 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 POTEB3A0JP26 581 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 CABYRO75952 493 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 POTEBQ6S5H4 581 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 MAGEB6Q8N7X4 407 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 DDX11Q96FC9 970 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 FGD4Q96M96 766 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 RIOK1Q9BRS2 568 aaKnown RBP21.39■■□□□ 1.01
SSBP4-207ENST00000600244 KATNBL1Q9H079 304 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 SH2D4AQ9H788 454 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 LMCD1Q9NZU5 365 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 ZNF318Q5VUA4 2279 aa21.39■■□□□ 1.01
SSBP4-207ENST00000600244 IDH1O75874 414 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms