RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 KIF2CQ99661 725 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 SLC38A10Q9HBR0 1119 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 ZNF536O15090 1300 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 HTTP42858 3142 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 PLXNB2O15031 1838 aa16.08■□□□□ 0.17
VRK3-219ENST00000600137 ERICH2A1L162 156 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
VRK3-219ENST00000600137 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
VRK3-219ENST00000600137 PSMA5P28066 241 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 PSMC4P43686 418 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 STAT2P52630 851 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 GRM4Q14833 912 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
VRK3-219ENST00000600137 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 RUFY3Q7L099 469 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 OTOP1Q7RTM1 612 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 KIFC2Q96AC6 838 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 ERO1AQ96HE7 468 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 MAP3K14Q99558 947 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 MOV10L1Q9BXT6 1211 aaKnown RBP16.08■□□□□ 0.16
VRK3-219ENST00000600137 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
VRK3-219ENST00000600137 BAZ2BQ9UIF8 2168 aaKnown RBP16.07■□□□□ 0.16
VRK3-219ENST00000600137 EVCP57679 992 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 SNAP25P60880 206 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
VRK3-219ENST00000600137 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
VRK3-219ENST00000600137 Q6ZUG5 572 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 EFCC1Q9HA90 598 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 GJD2Q9UKL4 321 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 RIPK3Q9Y572 518 aa16.07■□□□□ 0.16
VRK3-219ENST00000600137 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
VRK3-219ENST00000600137 FDX1P10109 184 aa16.06■□□□□ 0.16
VRK3-219ENST00000600137 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
VRK3-219ENST00000600137 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
VRK3-219ENST00000600137 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
VRK3-219ENST00000600137 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
VRK3-219ENST00000600137 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
VRK3-219ENST00000600137 UPF3BQ9BZI7 483 aaKnown RBP16.06■□□□□ 0.16
VRK3-219ENST00000600137 RANBP17Q9H2T7 1088 aaKnown RBP16.06■□□□□ 0.16
VRK3-219ENST00000600137 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
VRK3-219ENST00000600137 CYTH3O43739 400 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 DDAH1O94760 285 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 PARP1P09874 1014 aaKnown RBP16.05■□□□□ 0.16
VRK3-219ENST00000600137 STAT3P40763 770 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
VRK3-219ENST00000600137 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
VRK3-219ENST00000600137 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 USP6NLQ92738 828 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 ALDH8A1Q9H2A2 487 aaPredicted RBP16.05■□□□□ 0.16
VRK3-219ENST00000600137 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
VRK3-219ENST00000600137 GABRQQ9UN88 632 aa16.05■□□□□ 0.16
VRK3-219ENST00000600137 ZNFX1Q9P2E3 1918 aaKnown RBP16.04■□□□□ 0.16
VRK3-219ENST00000600137 CCDC69A6NI79 296 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 ZBED4O75132 1171 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 ERCC3P19447 782 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 RXRAP19793 462 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 OAZ1P54368 228 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 BRF1Q92994 677 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 SRRDQ9UH36 339 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 TRIM17Q9Y577 477 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
VRK3-219ENST00000600137 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
VRK3-219ENST00000600137 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
VRK3-219ENST00000600137 MAPK4P31152 587 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 FCGRTP55899 365 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 KIF22Q14807 665 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 MORN1Q5T089 497 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
VRK3-219ENST00000600137 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 CPXCR1Q8N123 301 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 FANCBQ8NB91 859 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 TEX13BQ9BXU2 312 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
VRK3-219ENST00000600137 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 SLC25A27O95847 323 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 GNRH1P01148 92 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 PTPREP23469 700 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms