RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PCDHB15Q9Y5E8 787 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 PRUNE2Q8WUY3 3088 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 TRIM43BA6NCK2 446 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 TDO2P48775 406 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 C9orf50Q5SZB4 431 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 TRIM43Q96BQ3 446 aaPredicted RBP17.54■□□□□ 0.4
IRF3-223ENST00000599223 FGD4Q96M96 766 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 STXBP5LQ9Y2K9 1186 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
IRF3-223ENST00000599223 LCTP09848 1927 aa17.54■□□□□ 0.4
IRF3-223ENST00000599223 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 FOXP2O15409 715 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 RARBP10826 455 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 ITGB8P26012 769 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 BADQ92934 168 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 PRKAG2Q9UGJ0 569 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 VCANP13611 3396 aa17.53■□□□□ 0.4
IRF3-223ENST00000599223 SYNRGQ9UMZ2 1314 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 A0A1W2PQ45 241 aaPredicted RBP17.52■□□□□ 0.4
IRF3-223ENST00000599223 A0A1W2PQY0 241 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 POTEB2H3BUK9 544 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 ADCY6O43306 1168 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 ADAMTS4O75173 837 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.4
IRF3-223ENST00000599223 ZFYP08048 801 aaPredicted RBP17.52■□□□□ 0.4
IRF3-223ENST00000599223 COPB2P35606 906 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 TLE2Q04725 743 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 SHHQ15465 462 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 C1orf53Q5VUE5 145 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 IFNL3Q8IZI9 196 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
IRF3-223ENST00000599223 MYADML2A6NDP7 307 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 APPP05067 770 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 AKR1A1P14550 325 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
IRF3-223ENST00000599223 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 KIFC2Q96AC6 838 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 FAM161BQ96MY7 647 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 SLC38A10Q9HBR0 1119 aa17.51■□□□□ 0.39
IRF3-223ENST00000599223 RAVER2Q9HCJ3 691 aaKnown RBP17.51■□□□□ 0.39
IRF3-223ENST00000599223 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 DLL1O00548 723 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 ATP2A1O14983 1001 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 GNAT2P19087 354 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 ZMYM1Q5SVZ6 1142 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
IRF3-223ENST00000599223 MKL1Q969V6 931 aa17.5■□□□□ 0.39
IRF3-223ENST00000599223 SYNGAP1Q96PV0 1343 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
IRF3-223ENST00000599223 PQBP1O60828 265 aaKnown RBP17.49■□□□□ 0.39
IRF3-223ENST00000599223 TTLL1O95922 423 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 EPHB4P54760 987 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 MAMDC4Q6UXC1 1216 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 CCDC129Q6ZRS4 1044 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
IRF3-223ENST00000599223 RNF180Q86T96 592 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 GMCL1P1Q8NEA9 526 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
IRF3-223ENST00000599223 CNPY2Q9Y2B0 182 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
IRF3-223ENST00000599223 CLTBP09497 229 aa17.48■□□□□ 0.39
IRF3-223ENST00000599223 PPARAQ07869 468 aa17.48■□□□□ 0.39
IRF3-223ENST00000599223 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
IRF3-223ENST00000599223 ZNF444Q8N0Y2 327 aaPredicted RBP17.48■□□□□ 0.39
IRF3-223ENST00000599223 MSL3Q8N5Y2 521 aaKnown RBP17.48■□□□□ 0.39
IRF3-223ENST00000599223 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
IRF3-223ENST00000599223 MX1P20591 662 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 ACLYP53396 1101 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
IRF3-223ENST00000599223 KLHDC9Q8NEP7 349 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 DDX11Q96FC9 970 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 NAPBQ9H115 298 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 INCENPQ9NQS7 918 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
IRF3-223ENST00000599223 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
IRF3-223ENST00000599223 ZNF536O15090 1300 aa17.47■□□□□ 0.39
IRF3-223ENST00000599223 KIAA0355O15063 1070 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 NMT2O60551 498 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 ZBED4O75132 1171 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 TSPY3P0CV98 308 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 TSPY8P0CW00 308 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 BMP3P12645 472 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 TFAP4Q01664 338 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
IRF3-223ENST00000599223 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 ZNF287Q9HBT7 754 aa17.46■□□□□ 0.39
IRF3-223ENST00000599223 DDX49Q9Y6V7 483 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms