RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 DIS3Q9Y2L1 958 aaKnown RBP23.03■■□□□ 1.28
IRF3-222ENST00000599144 SYNRGQ9UMZ2 1314 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 RAG1P15918 1043 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 ZSCAN25Q6NSZ9 544 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 MKNK2Q9HBH9 465 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 EPB41L4AQ9HCS5 686 aaPredicted RBP23.02■■□□□ 1.28
IRF3-222ENST00000599144 TMEM39AQ9NV64 488 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 CLIP2Q9UDT6 1046 aa23.02■■□□□ 1.28
IRF3-222ENST00000599144 KIAA0355O15063 1070 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 ADCY6O43306 1168 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 ACLYP53396 1101 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 SMAD3P84022 425 aaKnown RBP23.01■■□□□ 1.27
IRF3-222ENST00000599144 FAAP100Q0VG06 881 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 KIFC2Q96AC6 838 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 DDX11Q96FC9 970 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 STARD7Q9NQZ5 370 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 COL11A1P12107 1806 aaPredicted RBP23.01■■□□□ 1.27
IRF3-222ENST00000599144 PARP14Q460N5 1801 aa23.01■■□□□ 1.27
IRF3-222ENST00000599144 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
IRF3-222ENST00000599144 LRRC47Q8N1G4 583 aaKnown RBP23■■□□□ 1.27
IRF3-222ENST00000599144 ECHDC1Q9NTX5 307 aa23■■□□□ 1.27
IRF3-222ENST00000599144 M0R2C6 588 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 KCNA10Q16322 511 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 SBK1Q52WX2 424 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 FGD4Q96M96 766 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 NYAP2Q9P242 653 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 FAM184BQ9ULE4 1060 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 UNC80Q8N2C7 3258 aa22.99■■□□□ 1.27
IRF3-222ENST00000599144 DNAJC25-GNG10A0A024R161 153 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 IGKV6D-41A0A0C4DH26 115 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 FOSL2P15408 326 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 COPB2P35606 906 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 FPGSQ05932 587 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 KLHDC9Q8NEP7 349 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 MYH8P13535 1937 aa22.98■■□□□ 1.27
IRF3-222ENST00000599144 LAMA2P24043 3122 aaKnown RBP22.97■■□□□ 1.27
IRF3-222ENST00000599144 GPAA1O43292 621 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 ZBED4O75132 1171 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 CCSAPQ6IQ19 270 aaPredicted RBP22.97■■□□□ 1.27
IRF3-222ENST00000599144 KBTBD3Q8NAB2 608 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 APPBP2Q92624 585 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 CEP95Q96GE4 821 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 HOMER2Q9NSB8 354 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.97■■□□□ 1.27
IRF3-222ENST00000599144 RCAN3Q9UKA8 241 aa22.97■■□□□ 1.27
IRF3-222ENST00000599144 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
IRF3-222ENST00000599144 DDX49Q9Y6V7 483 aaKnown RBP22.97■■□□□ 1.27
IRF3-222ENST00000599144 CUL9Q8IWT3 2517 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 RNF113AO15541 343 aaKnown RBP22.96■■□□□ 1.27
IRF3-222ENST00000599144 APPP05067 770 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 PTGS1P23219 599 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 TDO2P48775 406 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 GRIN2CQ14957 1233 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 PRPF38AQ8NAV1 312 aaKnown RBP22.96■■□□□ 1.27
IRF3-222ENST00000599144 SEC62Q99442 399 aaKnown RBP22.96■■□□□ 1.27
IRF3-222ENST00000599144 ISY1Q9ULR0 285 aaKnown RBP22.96■■□□□ 1.27
IRF3-222ENST00000599144 SYNGAP1Q96PV0 1343 aa22.96■■□□□ 1.27
IRF3-222ENST00000599144 SMCHD1A6NHR9 2005 aa22.95■■□□□ 1.26
IRF3-222ENST00000599144 DCDC2CA8MYV0 355 aa22.95■■□□□ 1.26
IRF3-222ENST00000599144 C6orf222P0C671 652 aaPredicted RBP22.95■■□□□ 1.26
IRF3-222ENST00000599144 MAMDC4Q6UXC1 1216 aa22.95■■□□□ 1.26
IRF3-222ENST00000599144 ANKRD33Q7Z3H0 272 aa22.95■■□□□ 1.26
IRF3-222ENST00000599144 ANKRD35Q8N283 1001 aa22.95■■□□□ 1.26
IRF3-222ENST00000599144 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.95■■□□□ 1.261e-10■■□□□ 11.4
IRF3-222ENST00000599144 TSEN34Q9BSV6 310 aaKnown RBP22.95■■□□□ 1.26
IRF3-222ENST00000599144 GRXCR1A8MXD5 290 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 ASGR1P07306 291 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 CNTN2Q02246 1040 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 ZNF444Q8N0Y2 327 aaPredicted RBP22.94■■□□□ 1.26
IRF3-222ENST00000599144 VTI1AQ96AJ9 217 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 SLC38A10Q9HBR0 1119 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 TBX21Q9UL17 535 aa22.94■■□□□ 1.26
IRF3-222ENST00000599144 GREB1LQ9C091 1923 aaPredicted RBP22.93■■□□□ 1.26
IRF3-222ENST00000599144 DUSP11O75319 330 aaKnown RBP22.93■■□□□ 1.26
IRF3-222ENST00000599144 SNAP25P60880 206 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 CCDC144BQ3MJ40 725 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 SLFN13Q68D06 897 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 C16orf59Q7L2K0 433 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 ARMCX2Q7L311 632 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 MSL3Q8N5Y2 521 aaKnown RBP22.93■■□□□ 1.26
IRF3-222ENST00000599144 USP38Q8NB14 1042 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 NUP133Q8WUM0 1156 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 TOX2Q96NM4 488 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 PPP1R12CQ9BZL4 782 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 MTMR4Q9NYA4 1195 aa22.93■■□□□ 1.26
IRF3-222ENST00000599144 ZNFX1Q9P2E3 1918 aaKnown RBP22.92■■□□□ 1.26
IRF3-222ENST00000599144 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.92■■□□□ 1.26
IRF3-222ENST00000599144 MOXD2PA6NHM9 499 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 ATP2A1O14983 1001 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 TIMP1P01033 207 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 ACRP10323 421 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 DNAJB2P25686 324 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 BEX3Q00994 111 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 GIMAP6Q6P9H5 292 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 RASGRP2Q7LDG7 609 aa22.92■■□□□ 1.26
IRF3-222ENST00000599144 PBX2P40425 430 aa22.91■■□□□ 1.26
IRF3-222ENST00000599144 CCDC144CPQ8IYA2 1237 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms