RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 SNRNP48Q6IEG0 339 aaKnown RBP18.71■□□□□ 0.59
SMG9-208ENST00000598886 PRPF38AQ8NAV1 312 aaKnown RBP18.71■□□□□ 0.59
SMG9-208ENST00000598886 NEDD1Q8NHV4 660 aa18.71■□□□□ 0.59
SMG9-208ENST00000598886 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
SMG9-208ENST00000598886 PHF24Q9UPV7 400 aa18.71■□□□□ 0.59
SMG9-208ENST00000598886 LAMA4Q16363 1823 aa18.7■□□□□ 0.58
SMG9-208ENST00000598886 KBTBD13C9JR72 458 aa18.7■□□□□ 0.58
SMG9-208ENST00000598886 ERC2O15083 957 aa18.7■□□□□ 0.58
SMG9-208ENST00000598886 MAMDC4Q6UXC1 1216 aa18.7■□□□□ 0.58
SMG9-208ENST00000598886 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
SMG9-208ENST00000598886 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
SMG9-208ENST00000598886 RAD21O60216 631 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
SMG9-208ENST00000598886 TTLL1O95922 423 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 ADCYAP1R1P41586 468 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 PPARAQ07869 468 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 TRIM60Q495X7 471 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 Q7L0L9 218 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 MSL3Q8N5Y2 521 aaKnown RBP18.69■□□□□ 0.58
SMG9-208ENST00000598886 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 XPNPEP3Q9NQH7 507 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 PDLIM7Q9NR12 457 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 SYNGAP1Q96PV0 1343 aa18.69■□□□□ 0.58
SMG9-208ENST00000598886 ADCY6O43306 1168 aa18.68■□□□□ 0.58
SMG9-208ENST00000598886 NOVP48745 357 aa18.68■□□□□ 0.58
SMG9-208ENST00000598886 LRRFIP1Q32MZ4 808 aaKnown RBP18.68■□□□□ 0.58
SMG9-208ENST00000598886 CCDC129Q6ZRS4 1044 aa18.68■□□□□ 0.58
SMG9-208ENST00000598886 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
SMG9-208ENST00000598886 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
SMG9-208ENST00000598886 ATP11BQ9Y2G3 1177 aa18.68■□□□□ 0.58
SMG9-208ENST00000598886 PGK1P00558 417 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 APPP05067 770 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 OAZ1P54368 228 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 CCSAPQ6IQ19 270 aaPredicted RBP18.67■□□□□ 0.58
SMG9-208ENST00000598886 SH3RF1Q7Z6J0 888 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 ZNF467Q7Z7K2 595 aaPredicted RBP18.67■□□□□ 0.58
SMG9-208ENST00000598886 DEFB123Q8N688 67 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 NACAP1Q9BZK3 213 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 IL17RBQ9NRM6 502 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 MTMR10Q9NXD2 777 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 FEM1BQ9UK73 627 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 ZNF536O15090 1300 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 SYNRGQ9UMZ2 1314 aa18.67■□□□□ 0.58
SMG9-208ENST00000598886 TRIM43BA6NCK2 446 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 RARBP10826 455 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 AKR1A1P14550 325 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 TFAP4Q01664 338 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
SMG9-208ENST00000598886 RASGRP2Q7LDG7 609 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 FERMT2Q96AC1 680 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 TRIM43Q96BQ3 446 aaPredicted RBP18.66■□□□□ 0.58
SMG9-208ENST00000598886 GMCL1Q96IK5 515 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 KATNBL1Q9H079 304 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 NAPBQ9H115 298 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
SMG9-208ENST00000598886 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 ANAPC4Q9UJX5 808 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 UNC80Q8N2C7 3258 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 CDH23Q9H251 3354 aa18.66■□□□□ 0.58
SMG9-208ENST00000598886 A0A0C4DFX4 3053 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 A0A1W2PQ45 241 aaPredicted RBP18.65■□□□□ 0.58
SMG9-208ENST00000598886 A0A1W2PQY0 241 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 POTEB2H3BUK9 544 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 FGRP09769 529 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 BMP3P12645 472 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 ITGB8P26012 769 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 PDE4BQ07343 736 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 SLFN13Q68D06 897 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 CPXCR1Q8N123 301 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 KLHDC9Q8NEP7 349 aa18.65■□□□□ 0.58
SMG9-208ENST00000598886 TSPY3P0CV98 308 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 TSPY8P0CW00 308 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 PDE1AP54750 535 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 TLE2Q04725 743 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 ASTN1O14525 1302 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 EYSQ5T1H1 3165 aa18.64■□□□□ 0.57
SMG9-208ENST00000598886 CUL9Q8IWT3 2517 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 MYADML2A6NDP7 307 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 NMT2O60551 498 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 PLA2G6O60733 806 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 ZBED4O75132 1171 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
SMG9-208ENST00000598886 CTDSPL2Q05D32 466 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 ALX1Q15699 326 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 C9orf50Q5SZB4 431 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
SMG9-208ENST00000598886 RNF180Q86T96 592 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 CHST13Q8NET6 341 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 LBHD1Q9BQE6 289 aaPredicted RBP18.63■□□□□ 0.57
SMG9-208ENST00000598886 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
SMG9-208ENST00000598886 A0A0D9SFI3 127 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 CTAGE5O15320 804 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 ORC4O43929 436 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms