RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
GRAMD1A-209ENST00000598580 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
GRAMD1A-209ENST00000598580 PRDM5Q9NQX1 630 aaPredicted RBP13.21□□□□□ -0.29
GRAMD1A-209ENST00000598580 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
GRAMD1A-209ENST00000598580 DIS3Q9Y2L1 958 aaKnown RBP13.21□□□□□ -0.29
GRAMD1A-209ENST00000598580 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.3
GRAMD1A-209ENST00000598580 UNC80Q8N2C7 3258 aa13.21□□□□□ -0.3
GRAMD1A-209ENST00000598580 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
GRAMD1A-209ENST00000598580 LTBP2Q14767 1821 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 RARBP10826 455 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 MAMDC4Q6UXC1 1216 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 KLHDC9Q8NEP7 349 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 TEX13BQ9BXU2 312 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 TTC28Q96AY4 2481 aa13.19□□□□□ -0.3
GRAMD1A-209ENST00000598580 CTAGE5O15320 804 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 PTGS1P23219 599 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 SEMA6BQ9H3T3 888 aa13.18□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZNF536O15090 1300 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 KIAA0355O15063 1070 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 TDO2P48775 406 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 ACLYP53396 1101 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 KCNA10Q16322 511 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 MYH7P12883 1935 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 MYH8P13535 1937 aa13.17□□□□□ -0.3
GRAMD1A-209ENST00000598580 ASTN1O14525 1302 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 NMT2O60551 498 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 PQBP1O60828 265 aaKnown RBP13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 APPP05067 770 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 CLTBP09497 229 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 AKR1A1P14550 325 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 SNAP25P60880 206 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 RNF180Q86T96 592 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
GRAMD1A-209ENST00000598580 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZBED4O75132 1171 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 TTLL1O95922 423 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 GNAT2P19087 354 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 COPB2P35606 906 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 CDK7P50613 346 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 TFAP4Q01664 338 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 ACVR2BQ13705 512 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 FAM184BQ9ULE4 1060 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
GRAMD1A-209ENST00000598580 VCANP13611 3396 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms