RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZNF865P0CJ78 1059 aaPredicted RBP20.3■□□□□ 0.84
PNKP-210ENST00000597965 FDX1P10109 184 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 RASA1P20936 1047 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 TDO2P48775 406 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 MAMDC4Q6UXC1 1216 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 TOX2Q96NM4 488 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 GUCD1Q96NT3 240 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.3■□□□□ 0.84
PNKP-210ENST00000597965 NACAP1Q9BZK3 213 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 CUL9Q8IWT3 2517 aa20.3■□□□□ 0.84
PNKP-210ENST00000597965 MROH7Q68CQ1 1323 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 LAMA2P24043 3122 aaKnown RBP20.29■□□□□ 0.84
PNKP-210ENST00000597965 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
PNKP-210ENST00000597965 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 DCDC2CA8MYV0 355 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 SMIM22K7EJ46 135 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 RNF113AO15541 343 aaKnown RBP20.29■□□□□ 0.84
PNKP-210ENST00000597965 NDUFB10O96000 172 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 CHGBP05060 677 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 APPP05067 770 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 SLC3A2P08195 630 aaKnown RBP20.29■□□□□ 0.84
PNKP-210ENST00000597965 RAG1P15918 1043 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 PPP4R3BQ5MIZ7 849 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.29■□□□□ 0.84
PNKP-210ENST00000597965 FAM161BQ96MY7 647 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 CLIP2Q9UDT6 1046 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 FEM1BQ9UK73 627 aa20.29■□□□□ 0.84
PNKP-210ENST00000597965 TMEM265A0A087WTH1 108 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 TRIM43BA6NCK2 446 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 KIAA0355O15063 1070 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 SMARCA5O60264 1052 aaPredicted RBP20.28■□□□□ 0.84
PNKP-210ENST00000597965 TTLL1O95922 423 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 OAZ1P54368 228 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 ANKRD33Q7Z3H0 272 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 ANKRD35Q8N283 1001 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 PCSK9Q8NBP7 692 aaKnown RBP20.28■□□□□ 0.84
PNKP-210ENST00000597965 CHST13Q8NET6 341 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 MKL1Q969V6 931 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 TRIM43Q96BQ3 446 aaPredicted RBP20.28■□□□□ 0.84
PNKP-210ENST00000597965 TMEM39AQ9NV64 488 aa20.28■□□□□ 0.84
PNKP-210ENST00000597965 DNAJC25-GNG10A0A024R161 153 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 GPAA1O43292 621 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 PQBP1O60828 265 aaKnown RBP20.27■□□□□ 0.84
PNKP-210ENST00000597965 ADAMTS4O75173 837 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 DUSP11O75319 330 aaKnown RBP20.27■□□□□ 0.84
PNKP-210ENST00000597965 ACLYP53396 1101 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 PDE4BQ07343 736 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 CCDC174Q6PII3 467 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.27■□□□□ 0.84
PNKP-210ENST00000597965 GLT1D1Q96MS3 346 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.84
PNKP-210ENST00000597965 ABHD16BQ9H3Z7 469 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
PNKP-210ENST00000597965 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 PATL2C9JE40 543 aaKnown RBP20.26■□□□□ 0.83
PNKP-210ENST00000597965 ERC2O15083 957 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
PNKP-210ENST00000597965 FPGSQ05932 587 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 STK11IPQ8N1F8 1099 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 GMCL1P1Q8NEA9 526 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 OSBP2Q969R2 916 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 KIFC2Q96AC6 838 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 RNPC3Q96LT9 517 aaKnown RBP20.26■□□□□ 0.83
PNKP-210ENST00000597965 SEMA6BQ9H3T3 888 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 SLC38A10Q9HBR0 1119 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 MTMR4Q9NYA4 1195 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 ZHX1Q9UKY1 873 aaPredicted RBP20.26■□□□□ 0.83
PNKP-210ENST00000597965 UNC80Q8N2C7 3258 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 ELP1O95163 1332 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 SYNRGQ9UMZ2 1314 aa20.26■□□□□ 0.83
PNKP-210ENST00000597965 TSPY3P0CV98 308 aa20.25■□□□□ 0.83
PNKP-210ENST00000597965 TSPY8P0CW00 308 aa20.25■□□□□ 0.83
PNKP-210ENST00000597965 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
PNKP-210ENST00000597965 CDX2Q99626 313 aaPredicted RBP20.25■□□□□ 0.83
PNKP-210ENST00000597965 TTC41PQ6P2S7 1318 aa20.25■□□□□ 0.83
PNKP-210ENST00000597965 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 SNAI1O95863 264 aaPredicted RBP20.24■□□□□ 0.83
PNKP-210ENST00000597965 CST5P28325 142 aaPredicted RBP20.24■□□□□ 0.83
PNKP-210ENST00000597965 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 ACVR2BQ13705 512 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 KCNA10Q16322 511 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 KLHDC9Q8NEP7 349 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 RIPK3Q9Y572 518 aa20.24■□□□□ 0.83
PNKP-210ENST00000597965 PLIN4Q96Q06 1357 aa20.23■□□□□ 0.83
PNKP-210ENST00000597965 BMP3P12645 472 aa20.23■□□□□ 0.83
PNKP-210ENST00000597965 IFNL3Q8IZI9 196 aa20.23■□□□□ 0.83
PNKP-210ENST00000597965 CHURC1Q8WUH1 139 aa20.23■□□□□ 0.83
PNKP-210ENST00000597965 RAVER2Q9HCJ3 691 aaKnown RBP20.23■□□□□ 0.83
PNKP-210ENST00000597965 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.23■□□□□ 0.83
PNKP-210ENST00000597965 C6orf222P0C671 652 aaPredicted RBP20.22■□□□□ 0.83
PNKP-210ENST00000597965 STAT2P52630 851 aa20.22■□□□□ 0.83
PNKP-210ENST00000597965 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
PNKP-210ENST00000597965 FAM160B2Q86V87 743 aa20.22■□□□□ 0.83
PNKP-210ENST00000597965 NEDD1Q8NHV4 660 aa20.22■□□□□ 0.83
PNKP-210ENST00000597965 MAFAQ8NHW3 353 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms