RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 RCAN1P53805 252 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 STAG2Q8N3U4 1231 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 LZTS2Q9BRK4 669 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
ARHGEF1-214ENST00000596957 PALM3A6NDB9 673 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CPLX1O14810 134 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CA12O43570 354 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CRHR2Q13324 411 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 PPP2R5BQ15173 497 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CPLX2Q6PUV4 134 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 PRR12Q9ULL5 1215 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 MYPNQ86TC9 1320 aa17.39■□□□□ 0.37
ARHGEF1-214ENST00000596957 SPDYE16A6NNV3 312 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 PLA2G6O60733 806 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 MCM2P49736 904 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 EVCP57679 992 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 PLS1Q14651 629 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 ZSCAN31Q96LW9 406 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 NCOA5Q9HCD5 579 aaKnown RBP17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 CPA4Q9UI42 421 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
ARHGEF1-214ENST00000596957 MYH4Q9Y623 1939 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 SNAP25P60880 206 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 CCDC174Q6PII3 467 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 HOMER1Q86YM7 354 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 ANKRD13CQ8N6S4 541 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
ARHGEF1-214ENST00000596957 VWA5AO00534 786 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 TLR2O60603 784 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 FDX1P10109 184 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 CDC27P30260 824 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 AKAP17AQ02040 695 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 CPXCR1Q8N123 301 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 NECAB1Q8N987 351 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 SH2B1Q9NRF2 756 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 SEC63Q9UGP8 760 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
ARHGEF1-214ENST00000596957 PFKFB2O60825 505 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 CDKL5O76039 1030 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 ME3Q16798 604 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 SRBD1Q8N5C6 995 aaKnown RBP17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 SLC38A10Q9HBR0 1119 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 RABGAP1Q9Y3P9 1069 aa17.35■□□□□ 0.37
ARHGEF1-214ENST00000596957 LARGE1O95461 756 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 CCNA1P78396 465 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 SCRN1Q12765 414 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 LBX2Q6XYB7 198 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 SPZ1Q9BXG8 430 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 JMJD4Q9H9V9 463 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 RBPJLQ9UBG7 517 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
ARHGEF1-214ENST00000596957 NID2Q14112 1375 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 PEX10O60683 326 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 PPFIA3O75145 1194 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 ECM2O94769 699 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 CD2BP2O95400 341 aaKnown RBP17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 SMARCA1P28370 1054 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 ERVK-24P63145 666 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 FAM110CQ1W6H9 321 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 SNRNP48Q6IEG0 339 aaKnown RBP17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 TRIM22Q8IYM9 498 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 JMYQ8N9B5 988 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 GTF3C6Q969F1 213 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 PIGSQ96S52 555 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 RANBP17Q9H2T7 1088 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms